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PLA2G16

COLON - Expression summary

RNA expression
HPA:10.6TPM
GTEx:10.7RPKM
FANTOM5:43.2Tags Per Million

COLON - Annotated protein expression
 

Antibody staining

Antibody HPA058997

  

Endothelial cells

 Not detected  

Glandular cells

 High  

Peripheral nerve/ganglion

 High  
 
 
 

COLON - HPA RNA-seq

Average TPM

10.6
overview Male, age 54 Sample 1
TPM: 9.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 4.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 3.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 10.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 20.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 14.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 8.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 25
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 14.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

10.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 13.9
Samples: 149

Max RPKM: 25.8
Min RPKM: 6.7
Std RPKM: 3.0
Median RPKM: 14.1
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 25.8
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 22.7
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 20.2
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 20.2
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 19.8
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 19.7
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 18.8
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 18.7
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 18.6
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 18.5
Show all
Colon - Transverse
RPKM: 8.3
Samples: 196

Max RPKM: 51.4
Min RPKM: 1.2
Std RPKM: 6.1
Median RPKM: 6.9
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 51.4
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 33.3
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 25.2
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 23.5
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 20.2
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 18.4
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 18.0
GTEX-OXRL-1426-SM-3NM9E 50-59 years, male 18.0
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 17.6
GTEX-S341-1426-SM-4AD6U 40-49 years, female 16.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

43.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 43.2
FF:10014-101C5 62,83,84 years, mixed 43.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.