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PNMA1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:20.1TPM
GTEx:30.4RPKM
FANTOM5:44.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA003817

  

Antibody HPA015007

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 Low   Not detected  

Peripheral nerve/ganglion

 Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

20.1
overview Male, age 54 Sample 1
TPM: 21.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 14
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 9.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 22.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 13.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 52
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 10.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 8.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 33.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 10.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 15.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 33.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 14.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

30.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 41.2
Samples: 149

Max RPKM: 78.9
Min RPKM: 12.3
Std RPKM: 11.0
Median RPKM: 41.3
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 78.9
GTEX-1399R-2126-SM-5K7WZ 30-39 years, male 72.2
GTEX-11DXZ-1626-SM-5GIDI 50-59 years, male 70.2
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 67.8
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 63.2
GTEX-WHWD-1526-SM-4OORV 50-59 years, male 62.7
GTEX-WHPG-1626-SM-4M1ZL 50-59 years, male 62.3
GTEX-13111-1926-SM-5GCOL 50-59 years, male 59.7
GTEX-WYVS-1126-SM-4SOJX 40-49 years, female 59.2
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 58.4
Show all
Colon - Transverse
RPKM: 22.2
Samples: 196

Max RPKM: 68.6
Min RPKM: 4.5
Std RPKM: 14.6
Median RPKM: 18.8
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 68.6
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 64.8
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 51.4
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 51.2
GTEX-SNMC-1126-SM-4DM5M 20-29 years, male 50.2
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 49.6
GTEX-145ME-0826-SM-5O9AF 40-49 years, female 49.3
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 49.1
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 47.8
GTEX-S341-1426-SM-4AD6U 40-49 years, female 47.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

44.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 44.7
FF:10014-101C5 62,83,84 years, mixed 44.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.