Fields »
ABOUT
HELP
BLOG
DPP7

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:18.1TPM
GTEx:45.7RPKM
FANTOM5:66.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Low
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA021282

  

Antibody CAB025541

  

Endothelial cells

 Medium   Not detected  

Glandular cells

 Low   Not detected  

Peripheral nerve/ganglion

 Medium   Not detected  
   
   

COLON - HPA RNA-seq

Average TPM

18.1
overview Male, age 54 Sample 1
TPM: 37.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 16.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 15.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 16.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 19.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 12.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 4.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 13.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 13.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 18.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 15
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 29.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 23.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

45.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 55.0
Samples: 149

Max RPKM: 90.0
Min RPKM: 30.2
Std RPKM: 11.6
Median RPKM: 54.8
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 90.0
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 87.5
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 86.4
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 82.6
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 82.3
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 77.6
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 76.7
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 73.6
GTEX-145LS-2926-SM-5O99G 60-69 years, female 73.0
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 72.9
Show all
Colon - Transverse
RPKM: 38.5
Samples: 196

Max RPKM: 82.4
Min RPKM: 15.6
Std RPKM: 14.4
Median RPKM: 36.7
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 82.4
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 81.0
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 78.1
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 77.5
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 71.5
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 69.4
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 69.1
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 69.1
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 68.8
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 67.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

66.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 66.9
FF:10014-101C5 62,83,84 years, mixed 66.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.