Fields »
ABOUT
HELP
BLOG
RPS27

COLON - Expression summary

RNA expression
HPA:3842.6TPM
GTEx:138.5RPKM
FANTOM5:423.3Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

3842.6
overview Male, age 54 Sample 1
TPM: 2460.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 5184.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 3384.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 2834.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 4572.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 3814.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 4465.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 3950.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 3992.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 3840.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 3726.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 3881.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 3846.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

138.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 154.2
Samples: 149

Max RPKM: 336.3
Min RPKM: 81.1
Std RPKM: 48.6
Median RPKM: 143.1
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 336.3
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 306.3
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 282.6
GTEX-145LS-2926-SM-5O99G 60-69 years, female 268.5
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 257.5
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 252.6
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 249.6
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 246.1
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 244.9
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 243.5
Show all
Colon - Transverse
RPKM: 126.5
Samples: 196

Max RPKM: 334.3
Min RPKM: 59.6
Std RPKM: 42.7
Median RPKM: 118.9
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 334.3
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 303.4
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 284.4
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 264.6
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 233.0
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 231.0
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 223.9
GTEX-OXRL-1426-SM-3NM9E 50-59 years, male 223.9
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 218.0
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 207.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

423.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 423.3
FF:10014-101C5 62,83,84 years, mixed 423.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.