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PRKRA

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:21.0TPM
GTEx:17.6RPKM
FANTOM5:17.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA034996

  

Antibody HPA034997

  

Antibody CAB004648

  

Endothelial cells

 Not detected   Not detected   Medium  

Glandular cells

 Medium   Medium   Medium  

Peripheral nerve/ganglion

 High   High   Medium  
     
     

COLON - HPA RNA-seq

Average TPM

21.0
overview Male, age 54 Sample 1
TPM: 20.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 15.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 13.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 21.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 12.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 34.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 22.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 21.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 23.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 23.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 21.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 25
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 17.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

17.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 21.0
Samples: 149

Max RPKM: 33.9
Min RPKM: 13.1
Std RPKM: 3.7
Median RPKM: 20.2
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 33.9
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 33.2
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 31.5
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 31.0
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 29.9
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 29.3
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 29.2
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 29.1
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 27.6
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 27.2
Show all
Colon - Transverse
RPKM: 15.0
Samples: 196

Max RPKM: 29.6
Min RPKM: 6.4
Std RPKM: 4.7
Median RPKM: 14.0
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 29.6
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 26.9
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 26.6
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 26.5
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 25.8
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 25.5
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 24.8
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 24.4
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 24.4
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 23.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

17.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 17.6
FF:10014-101C5 62,83,84 years, mixed 17.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.