Fields »
ABOUT
HELP
BLOG
CLDN7

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:351.2TPM
GTEx:117.6RPKM
FANTOM5:317.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:High
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA014703

  

Antibody CAB013063

  

Endothelial cells

 Low   Not detected  

Glandular cells

 High   High  

Peripheral nerve/ganglion

 Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

351.2
overview Male, age 54 Sample 1
TPM: 363.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 309.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 515.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 534.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 199.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 224.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 260.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 414.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 235.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 360.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 406.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 337.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 402.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

117.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 3.9
Samples: 149

Max RPKM: 65.1
Min RPKM: 0.0
Std RPKM: 9.4
Median RPKM: 1.1
GTEX-V955-1726-SM-4JBHF 60-69 years, male 65.1
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 55.0
GTEX-XBED-1726-SM-47JYO 60-69 years, male 51.0
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 42.8
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 29.1
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 24.9
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 19.7
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 19.1
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 18.2
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 15.8
Show all
Colon - Transverse
RPKM: 204.0
Samples: 196

Max RPKM: 656.6
Min RPKM: 0.2
Std RPKM: 160.8
Median RPKM: 232.4
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 656.6
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 576.4
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 543.5
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 532.7
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 520.5
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 516.9
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 455.0
GTEX-ZYWO-1626-SM-5E44H 40-49 years, female 444.9
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 434.3
GTEX-145MN-1726-SM-5SIA6 30-39 years, male 428.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

317.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 317.7
FF:10014-101C5 62,83,84 years, mixed 317.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.