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SF3A3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:17.5TPM
GTEx:13.0RPKM
FANTOM5:49.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 
 

Antibody staining

Antibody HPA032054

  

Antibody HPA032055

  

Endothelial cells

 High   Medium  

Glandular cells

 High   High  

Peripheral nerve/ganglion

 High  
      
   
   
   

COLON - HPA RNA-seq

Average TPM

17.5
overview Male, age 54 Sample 1
TPM: 13.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 13
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 10.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 16.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 12.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 23
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 24.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 19.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 19.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 21.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 19.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 19.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 13.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

13.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 13.6
Samples: 149

Max RPKM: 19.6
Min RPKM: 8.5
Std RPKM: 2.1
Median RPKM: 13.5
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 19.6
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 19.1
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 17.6
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 17.5
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 17.4
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 17.3
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 17.3
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 17.3
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 17.2
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 17.2
Show all
Colon - Transverse
RPKM: 12.6
Samples: 196

Max RPKM: 19.7
Min RPKM: 5.2
Std RPKM: 2.2
Median RPKM: 12.2
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 19.7
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 19.4
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 17.8
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 17.5
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 17.2
GTEX-11EQ9-1426-SM-5987G 30-39 years, male 17.1
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 17.1
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 16.9
GTEX-145ME-0826-SM-5O9AF 40-49 years, female 16.6
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 16.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

49.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 49.7
FF:10014-101C5 62,83,84 years, mixed 49.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.