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AP3M1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:21.9TPM
GTEx:11.0RPKM
FANTOM5:32.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 
 
 

Antibody staining

Antibody HPA045591

  

Antibody HPA048380

  

Endothelial cells

 Medium  

Glandular cells

 Medium   Low  

Peripheral nerve/ganglion

 Low  
      
      
   
   
   

COLON - HPA RNA-seq

Average TPM

21.9
overview Male, age 54 Sample 1
TPM: 23.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 19.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 18.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 16.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 17.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 24.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 25.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 20.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 25.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 25.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 29.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 23.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 15.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

11.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 11.5
Samples: 149

Max RPKM: 17.9
Min RPKM: 6.3
Std RPKM: 2.1
Median RPKM: 11.6
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 17.9
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 16.7
GTEX-WYVS-1126-SM-4SOJX 40-49 years, female 16.5
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 15.7
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 15.3
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 15.1
GTEX-1122O-1426-SM-5H11R 60-69 years, female 15.0
GTEX-XXEK-1826-SM-4BRVC 50-59 years, male 15.0
GTEX-ZPIC-2626-SM-57WE2 40-49 years, female 14.8
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 14.7
Show all
Colon - Transverse
RPKM: 10.6
Samples: 196

Max RPKM: 17.8
Min RPKM: 4.2
Std RPKM: 1.8
Median RPKM: 10.6
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 17.8
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 15.8
GTEX-O5YW-1426-SM-3MJHF 50-59 years, male 15.1
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 15.0
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 14.7
GTEX-13VXT-2426-SM-5LU46 20-29 years, female 14.4
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 14.1
GTEX-133LE-1526-SM-5IFEN 20-29 years, female 13.7
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 13.7
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 13.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

32.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 32.4
FF:10014-101C5 62,83,84 years, mixed 32.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.