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AHNAK2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:8.3TPM
GTEx:14.9RPKM
FANTOM5:28.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA000878

  

Antibody HPA002940

  

Antibody HPA004145

  

Antibody HPA020111

  

Endothelial cells

 Not detected   Medium   Medium   Low  

Glandular cells

 Low   Not detected   Medium   Not detected  

Peripheral nerve/ganglion

 Not detected   Low  
       
       
       

COLON - HPA RNA-seq

Average TPM

8.3
overview Male, age 54 Sample 1
TPM: 6.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 6.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 6.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 26.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 1.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 18.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 9.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 11
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 12.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

14.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 22.6
Samples: 149

Max RPKM: 48.1
Min RPKM: 5.7
Std RPKM: 8.0
Median RPKM: 21.0
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 48.1
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 47.4
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 44.3
GTEX-ZP4G-1526-SM-57WE5 20-29 years, female 40.1
GTEX-WHWD-1526-SM-4OORV 50-59 years, male 40.0
GTEX-WYVS-1126-SM-4SOJX 40-49 years, female 38.9
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 38.7
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 38.3
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 38.0
GTEX-WHPG-1626-SM-4M1ZL 50-59 years, male 37.9
Show all
Colon - Transverse
RPKM: 9.0
Samples: 196

Max RPKM: 40.3
Min RPKM: 0.2
Std RPKM: 8.6
Median RPKM: 6.1
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 40.3
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 33.1
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 31.1
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 29.7
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 27.9
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 27.7
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 26.0
GTEX-RU1J-1326-SM-46MUL 20-29 years, female 25.1
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 24.0
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 23.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

28.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 28.5
FF:10014-101C5 62,83,84 years, mixed 28.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.