Fields »
ABOUT
HELP
BLOG
RPS19BP1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:30.0TPM
GTEx:60.1RPKM
FANTOM5:70.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA042874

  

Endothelial cells

 Low  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Low  
 
 

COLON - HPA RNA-seq

Average TPM

30.0
overview Male, age 54 Sample 1
TPM: 54.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 36.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 33.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 41.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 32.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 22.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 16.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 18.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 21.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 28.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 20.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 38.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 25
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

60.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 68.9
Samples: 149

Max RPKM: 122.2
Min RPKM: 38.6
Std RPKM: 16.1
Median RPKM: 67.4
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 122.2
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 120.7
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 116.0
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 113.3
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 106.4
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 106.2
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 101.2
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 99.6
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 96.9
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 96.1
Show all
Colon - Transverse
RPKM: 53.4
Samples: 196

Max RPKM: 104.8
Min RPKM: 22.6
Std RPKM: 12.0
Median RPKM: 52.3
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 104.8
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 94.5
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 92.8
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 88.1
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 81.2
GTEX-QMRM-1226-SM-447C6 50-59 years, male 79.7
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 79.6
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 75.2
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 74.0
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 72.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

70.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 70.5
FF:10014-101C5 62,83,84 years, mixed 70.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.