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FNBP1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:26.6TPM
GTEx:45.2RPKM
FANTOM5:62.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Not detected
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA019691

  

Antibody HPA022119

  

Endothelial cells

 Low   Not detected  

Glandular cells

 Not detected   Not detected  

Peripheral nerve/ganglion

 Low   Low  
   
   
   

COLON - HPA RNA-seq

Average TPM

26.6
overview Male, age 54 Sample 1
TPM: 22.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 20.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 12.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 16.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 18.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 54.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 22
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 20.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 47.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 21.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 30.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 37.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 23.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

45.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 64.8
Samples: 149

Max RPKM: 102.4
Min RPKM: 26.2
Std RPKM: 14.2
Median RPKM: 66.3
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 102.4
GTEX-13OVI-2126-SM-5KM3U 60-69 years, female 95.8
GTEX-13D11-0626-SM-5LZYY 50-59 years, female 92.8
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 92.2
GTEX-12BJ1-2026-SM-5FQUH 60-69 years, male 88.8
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 86.8
GTEX-139T6-1426-SM-5P9J7 50-59 years, male 86.4
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 85.0
GTEX-11DXZ-1626-SM-5GIDI 50-59 years, male 84.5
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 84.0
Show all
Colon - Transverse
RPKM: 30.4
Samples: 196

Max RPKM: 86.5
Min RPKM: 6.7
Std RPKM: 21.3
Median RPKM: 23.8
GTEX-Y114-1526-SM-4TT79 50-59 years, female 86.5
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 80.9
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 78.7
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 76.8
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 76.1
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 75.5
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 73.1
GTEX-ZYFG-1926-SM-5GID5 60-69 years, female 73.1
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 72.7
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 71.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

62.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 62.7
FF:10014-101C5 62,83,84 years, mixed 62.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.