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CLDN4

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:212.3TPM
GTEx:48.8RPKM
FANTOM5:220.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:High
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody CAB002610

  

Endothelial cells

 Not detected  

Glandular cells

 High  

Peripheral nerve/ganglion

 Not detected  
 
 
 

COLON - HPA RNA-seq

Average TPM

212.3
overview Male, age 54 Sample 1
TPM: 385.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 286.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 228.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 457.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 121.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 114.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 113.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 158.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 85.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 170.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 225.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 190.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 221.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

48.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 1.5
Samples: 149

Max RPKM: 40.8
Min RPKM: 0.0
Std RPKM: 4.9
Median RPKM: 0.3
GTEX-XBED-1726-SM-47JYO 60-69 years, male 40.8
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 37.9
GTEX-V955-1726-SM-4JBHF 60-69 years, male 16.9
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 13.2
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 12.2
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 8.4
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 8.0
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 5.6
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 4.8
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 4.6
Show all
Colon - Transverse
RPKM: 84.8
Samples: 196

Max RPKM: 708.7
Min RPKM: 0.0
Std RPKM: 80.6
Median RPKM: 91.2
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 708.7
GTEX-S4Q7-0826-SM-4AD5E 20-29 years, male 260.6
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 256.8
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 236.9
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 217.9
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 216.6
GTEX-1399S-1926-SM-5J2M5 30-39 years, female 209.2
GTEX-XUZC-1326-SM-4BRV2 30-39 years, female 205.6
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 204.5
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 201.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

220.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 220.9
FF:10014-101C5 62,83,84 years, mixed 220.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.