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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:148.7TPM
GTEx:75.8RPKM
FANTOM5:423.6Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
Chondrocytes:Not detected
 

Antibody staining

Antibody HPA054807

  

Antibody HPA059299

  

Antibody CAB009437

  

Adipocytes

 High   Not detected   Medium  

Fibroblasts

 High   Not detected   Not detected  

Peripheral nerve

 Medium   Medium  

Chondrocytes

 Not detected  
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA054807

  

Antibody HPA059299

  

Antibody CAB009437

  

Adipocytes

 Medium   Not detected   High  

Fibroblasts

 High   Not detected   Not detected  

Peripheral nerve

 Low   Not detected   Medium  
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

148.7
N/A Female, age 80 Sample 1
TPM: 96.5
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 223.2
N/A Female, age 57 Sample 3
TPM: 197.4
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 102
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 124.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

75.8

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 83.5
Samples: 350

Max RPKM: 231.9
Min RPKM: 10.0
Std RPKM: 44.9
Median RPKM: 76.7
GTEX-YB5K-2226-SM-4WWG1 40-49 years, female 231.9
GTEX-14DAR-1926-SM-5S2NQ 50-59 years, male 227.0
GTEX-S95S-1326-SM-2XCDK 60-69 years, male 224.3
GTEX-ZXES-2026-SM-5NQ6R 30-39 years, female 223.6
GTEX-11P7K-2026-SM-5GU74 30-39 years, male 213.3
GTEX-ZVT2-2226-SM-5NQ6P 50-59 years, female 208.9
GTEX-O5YV-0226-SM-48TBY 60-69 years, female 192.7
GTEX-13D11-2326-SM-5IJCY 50-59 years, female 187.4
GTEX-ZYWO-2526-SM-5GIDM 40-49 years, female 177.7
GTEX-PLZ6-1326-SM-3NB24 30-39 years, male 175.5
Show all
Adipose - Visceral (Omentum)
RPKM: 64.1
Samples: 227

Max RPKM: 183.2
Min RPKM: 11.3
Std RPKM: 37.4
Median RPKM: 54.8
GTEX-ZF29-0826-SM-5S2NP 60-69 years, female 183.2
GTEX-ZF2S-1526-SM-5S2OO 50-59 years, female 182.5
GTEX-ZQUD-0526-SM-57WG4 30-39 years, male 172.7
GTEX-1211K-1226-SM-5EQ4N 60-69 years, female 164.9
GTEX-ZT9W-1026-SM-57WG5 50-59 years, male 163.8
GTEX-WFJO-1026-SM-3GIKL 30-39 years, male 149.9
GTEX-139YR-0326-SM-5J1MC 50-59 years, male 147.2
GTEX-Y8LW-0926-SM-4VBQ8 50-59 years, female 146.2
GTEX-12696-1826-SM-5EGJS 60-69 years, male 145.5
GTEX-13O21-3126-SM-5J1OI 50-59 years, male 144.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

423.6

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 423.6
FF:10010-101C1 65,65,76 years, mixed 423.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.