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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:33.0TPM
GTEx:58.6RPKM
FANTOM5:170.4Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Medium
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA054807

 

Antibody HPA059299

 

Antibody CAB009437

 

Adipocytes

Not detected   Not detected   Medium  

Glandular cells

Medium   Medium   Low  

Myoepithelial cells

Medium   Medium   Medium  
     
     
     

BREAST - HPA RNA-seq

Average TPM

33.0

overview Female, age 52 Sample 1
TPM: 23.9
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80 Sample 2
TPM: 58.1
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47 Sample 3
TPM: 24.7
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38 Sample 4
TPM: 25.4
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

58.6

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 58.6
Samples: 214

Max RPKM: 238.7
Min RPKM: 4.8
Std RPKM: 44.0
Median RPKM: 44.3
GTEX-TKQ1-0226-SM-33HB5 30-39 years, male 238.7
GTEX-PSDG-1626-SM-48TCQ 50-59 years, male 200.8
GTEX-XGQ4-0926-SM-4AT4U 50-59 years, male 199.8
GTEX-ZQUD-1926-SM-51MSA 30-39 years, male 188.2
GTEX-S4Q7-1126-SM-4AD6R 20-29 years, male 169.5
GTEX-UTHO-1026-SM-3GAF7 60-69 years, male 168.0
GTEX-WFON-1826-SM-3GILG 40-49 years, male 155.8
GTEX-139T6-1626-SM-5PNYZ 50-59 years, male 155.1
GTEX-REY6-2426-SM-48FF5 60-69 years, male 152.3
GTEX-XQ8I-2426-SM-4WAXY 50-59 years, male 151.7
GTEX-YB5K-1626-SM-5IFIN 40-49 years, female 150.4
GTEX-ZDYS-1126-SM-5K7UB 50-59 years, male 148.4
GTEX-YFCO-1826-SM-4W1YH 40-49 years, male 144.7
GTEX-13FTW-1426-SM-5LZWZ 40-49 years, male 139.0
GTEX-11ZTT-2326-SM-5EQLG 60-69 years, female 137.5
GTEX-Y8E4-1626-SM-5S2MW 40-49 years, male 135.9
GTEX-11DXZ-1926-SM-5GZZL 50-59 years, male 132.2
GTEX-ZV6S-1826-SM-5NQ8D 40-49 years, female 129.2
GTEX-12KS4-0126-SM-5Q5A5 30-39 years, male 121.6
GTEX-XMK1-1126-SM-4IHJ8 40-49 years, male 121.5
GTEX-13FTX-1126-SM-5N9EN 20-29 years, female 120.1
GTEX-ZT9W-2026-SM-51MRA 50-59 years, male 119.6
GTEX-QMRM-1626-SM-4R1KV 50-59 years, male 117.0
GTEX-12BJ1-1826-SM-5HL9N 60-69 years, male 116.5
GTEX-117YX-1426-SM-5H12H 50-59 years, male 114.9
GTEX-ZPIC-1126-SM-5BC7F 40-49 years, female 114.4
GTEX-Y5V6-2126-SM-4WWFX 60-69 years, male 111.5
GTEX-ZYT6-0126-SM-5E45J 30-39 years, male 109.3
GTEX-ZAB4-2526-SM-5HL8M 40-49 years, male 107.9
GTEX-ZZ64-1226-SM-5E43R 20-29 years, male 107.4
GTEX-ZA64-1526-SM-5CVMD 20-29 years, male 106.2
GTEX-11P82-1326-SM-5HL62 20-29 years, male 105.9
GTEX-ZDTT-2126-SM-5S2OJ 60-69 years, male 105.7
GTEX-WY7C-2726-SM-3NB3P 50-59 years, male 102.8
GTEX-13CF3-2126-SM-5IFJP 60-69 years, female 100.1
GTEX-145ME-1526-SM-5Q5F2 40-49 years, female 99.8
GTEX-ZQG8-0726-SM-5P9H9 60-69 years, female 98.7
GTEX-144GM-0926-SM-5O994 20-29 years, male 98.4
GTEX-R55D-0826-SM-48FEA 50-59 years, male 97.0
GTEX-11NSD-0926-SM-5N9DR 20-29 years, male 96.0
GTEX-ZLFU-2126-SM-4WWEV 40-49 years, male 95.7
GTEX-YEC3-1026-SM-5IFI5 50-59 years, male 95.1
GTEX-S4UY-0726-SM-4AD6X 40-49 years, female 95.0
GTEX-S32W-2026-SM-4AD6E 50-59 years, female 93.8
GTEX-11EQ9-1826-SM-5Q5AJ 30-39 years, male 93.6
GTEX-14753-2426-SM-5LU8U 60-69 years, male 92.0
GTEX-14E6E-1326-SM-5S2NR 30-39 years, male 91.8
GTEX-R53T-1526-SM-48FEK 50-59 years, female 91.4
GTEX-SE5C-2126-SM-4BRUJ 40-49 years, female 90.6
GTEX-132AR-0826-SM-5EGK6 50-59 years, female 90.2
GTEX-X261-0626-SM-3NMD9 50-59 years, male 87.3
GTEX-T6MO-0326-SM-32QOK 40-49 years, female 86.7
GTEX-ZYWO-2326-SM-5GZY4 40-49 years, female 86.6
GTEX-11ZUS-0826-SM-5FQUY 30-39 years, male 86.0
GTEX-Y3I4-1526-SM-4TT7K 50-59 years, male 85.6
GTEX-XQ3S-1326-SM-4BOPQ 20-29 years, male 84.0
GTEX-XV7Q-2326-SM-4BRVZ 40-49 years, female 83.7
GTEX-1211K-1926-SM-5EQLB 60-69 years, female 83.2
GTEX-Y9LG-1426-SM-5IFJZ 30-39 years, male 77.5
GTEX-11LCK-2426-SM-5HL5F 30-39 years, male 77.4
GTEX-11TUW-1826-SM-5BC5D 60-69 years, male 75.8
GTEX-YB5E-1726-SM-5IFJ3 40-49 years, male 75.7
GTEX-13O61-1826-SM-5KM4I 60-69 years, male 73.9
GTEX-145MO-0826-SM-5NQBL 60-69 years, male 73.8
GTEX-12WSM-1726-SM-5BC6J 60-69 years, male 73.7
GTEX-ZWKS-2826-SM-5NQ74 30-39 years, male 73.2
GTEX-X4XY-0926-SM-4E3JD 60-69 years, male 72.3
GTEX-TMMY-0726-SM-33HBE 40-49 years, female 72.0
GTEX-12WSK-2226-SM-5GCO5 40-49 years, female 68.7
GTEX-11ONC-2126-SM-5HL6E 60-69 years, male 67.3
GTEX-QEL4-2126-SM-447AE 50-59 years, male 65.9
GTEX-Y114-2026-SM-4TT7L 50-59 years, female 65.1
GTEX-145MN-1926-SM-5SIAI 30-39 years, male 64.7
GTEX-11I78-2226-SM-5PNYA 50-59 years, female 64.3
GTEX-1399U-1826-SM-5PNZ1 50-59 years, female 63.6
GTEX-U412-1826-SM-4DXTJ 60-69 years, male 62.9
GTEX-13113-1726-SM-5GCOO 60-69 years, female 62.1
GTEX-WXYG-2226-SM-4E3IM 50-59 years, female 61.7
GTEX-13N1W-0626-SM-5MR4U 70-79 years, male 60.9
GTEX-RUSQ-2026-SM-4GIAK 50-59 years, male 60.1
GTEX-1117F-2826-SM-5GZXL 60-69 years, female 60.0
GTEX-1192X-2326-SM-5987X 50-59 years, male 59.6
GTEX-11DZ1-0326-SM-5N9BN 50-59 years, male 59.4
GTEX-XUW1-2326-SM-4BOO5 50-59 years, female 59.4
GTEX-Y5V5-2126-SM-4WWFO 60-69 years, female 59.3
GTEX-WYJK-1326-SM-3NB2T 50-59 years, male 59.2
GTEX-Y8LW-1626-SM-5IFHX 50-59 years, female 59.1
GTEX-ZUA1-1526-SM-59HLS 40-49 years, male 58.9
GTEX-11O72-2126-SM-5N9FO 40-49 years, male 58.7
GTEX-12WSN-1326-SM-5GCNT 40-49 years, male 58.0
GTEX-RWS6-1926-SM-47JXY 60-69 years, female 57.3
GTEX-11GSO-1926-SM-5A5K3 60-69 years, male 52.2
GTEX-XUJ4-1926-SM-4BOOV 60-69 years, female 52.2
GTEX-139TU-0626-SM-5KM3X 60-69 years, male 50.2
GTEX-ZVT2-1826-SM-5NQ8W 50-59 years, female 50.1
GTEX-ZV7C-1826-SM-5NQ83 50-59 years, male 49.6
GTEX-144GL-2026-SM-5LU3O 50-59 years, male 49.2
GTEX-ZYW4-0826-SM-5GIDG 60-69 years, male 49.2
GTEX-11P7K-0726-SM-5EGKX 30-39 years, male 48.4
GTEX-11DXY-2326-SM-5GICW 60-69 years, male 48.3
GTEX-YJ8O-2226-SM-5IFHW 40-49 years, female 47.5
GTEX-13W46-0826-SM-5LU3H 50-59 years, male 47.3
GTEX-13D11-1026-SM-5IJFB 50-59 years, female 47.1
GTEX-Y5LM-1726-SM-4VDSX 40-49 years, female 46.5
GTEX-ZYFC-0826-SM-5E44K 50-59 years, male 45.5
GTEX-ZTX8-1226-SM-4YCE9 20-29 years, male 44.8
GTEX-12WSB-0626-SM-59HJO 60-69 years, female 44.3
GTEX-XMD1-0826-SM-4AT52 60-69 years, male 44.3
GTEX-13OW8-0226-SM-5K7UP 60-69 years, male 44.2
GTEX-117XS-1926-SM-5GICO 60-69 years, male 44.1
GTEX-146FH-0826-SM-5SI8T 50-59 years, female 44.0
GTEX-ZLV1-1426-SM-4WWES 60-69 years, female 42.5
GTEX-S4P3-1326-SM-4AD6V 50-59 years, female 42.0
GTEX-13N11-1726-SM-5J1OJ 50-59 years, female 41.5
GTEX-13O3Q-2226-SM-5KM4O 50-59 years, male 41.5
GTEX-1122O-1226-SM-5H113 60-69 years, female 40.3
GTEX-XYKS-1326-SM-4BRUN 60-69 years, female 40.3
GTEX-13PVQ-1026-SM-5KM3M 50-59 years, male 40.2
GTEX-VJWN-0726-SM-3GIJ8 50-59 years, female 39.7
GTEX-ZF29-1926-SM-5S2P1 60-69 years, female 39.4
GTEX-111YS-1926-SM-5GICC 60-69 years, male 39.2
GTEX-11WQK-2426-SM-5GU5C 50-59 years, male 39.0
GTEX-T2YK-2226-SM-32QPT 50-59 years, male 38.8
GTEX-QVJO-1826-SM-447C9 60-69 years, female 38.0
GTEX-11TT1-2126-SM-5GU5Y 20-29 years, male 37.1
GTEX-13NZ8-0126-SM-5IJCT 60-69 years, female 37.0
GTEX-XBED-1626-SM-47JYN 60-69 years, male 36.9
GTEX-1314G-1226-SM-5BC6D 30-39 years, male 36.8
GTEX-ZVT4-1026-SM-57WC4 50-59 years, female 36.8
GTEX-ZTTD-1026-SM-51MRD 50-59 years, male 36.7
GTEX-11P81-1926-SM-5BC53 30-39 years, female 36.6
GTEX-13W3W-1226-SM-5LU4H 60-69 years, female 36.6
GTEX-ZZPU-0626-SM-5E43T 50-59 years, female 36.4
GTEX-145LT-0726-SM-5S2VM 40-49 years, male 36.2
GTEX-WI4N-1426-SM-3LK7H 40-49 years, female 36.2
GTEX-TKQ2-1826-SM-33HB2 50-59 years, male 35.7
GTEX-WOFL-0826-SM-3MJG1 60-69 years, male 35.3
GTEX-ZVTK-0326-SM-51MRR 20-29 years, male 34.8
GTEX-11NV4-2026-SM-5N9DG 60-69 years, male 34.7
GTEX-13S86-1226-SM-5S2OA 40-49 years, male 34.5
GTEX-R55F-1726-SM-2TF4R 50-59 years, male 34.3
GTEX-13OW5-2226-SM-5L3HC 60-69 years, male 34.0
GTEX-S33H-0326-SM-4AD6N 30-39 years, male 33.6
GTEX-UPK5-2326-SM-3P5Z8 40-49 years, male 33.3
GTEX-132Q8-1426-SM-5EGK7 60-69 years, male 32.5
GTEX-11OF3-1926-SM-59889 60-69 years, male 32.2
GTEX-UJHI-1426-SM-3DB9C 50-59 years, female 32.2
GTEX-U8XE-0826-SM-4E3J1 30-39 years, male 31.8
GTEX-133LE-1726-SM-5K7VQ 20-29 years, female 31.1
GTEX-ZY6K-1626-SM-5GZWV 50-59 years, male 31.0
GTEX-Y3IK-2326-SM-4WWDT 50-59 years, female 30.6
GTEX-S7SE-0826-SM-4AT4D 50-59 years, male 30.3
GTEX-13NZB-2126-SM-5MR4Y 30-39 years, male 30.2
GTEX-T5JW-2026-SM-4DM63 20-29 years, female 29.0
GTEX-QEG5-0726-SM-4R1JQ 20-29 years, male 28.7
GTEX-132NY-0826-SM-5K7Y7 60-69 years, male 28.2
GTEX-WRHU-0326-SM-3MJFY 50-59 years, female 27.9
GTEX-ZF3C-2326-SM-5S2MZ 50-59 years, female 27.8
GTEX-U3ZN-1926-SM-4DXSG 30-39 years, female 26.6
GTEX-ZDXO-0126-SM-5S2ND 60-69 years, male 26.6
GTEX-ZVZQ-0826-SM-51MRF 60-69 years, female 26.1
GTEX-ZXES-0826-SM-5E43C 30-39 years, female 26.0
GTEX-TML8-1226-SM-32QON 40-49 years, female 25.7
GTEX-ZVE2-1226-SM-5NQ8R 50-59 years, male 25.7
GTEX-13QIC-2326-SM-5LU5N 60-69 years, female 23.9
GTEX-WYBS-0926-SM-3NM94 60-69 years, female 23.3
GTEX-11EM3-1326-SM-5N9C6 20-29 years, female 23.2
GTEX-XMD2-0926-SM-4WWEF 60-69 years, female 22.7
GTEX-11EMC-2026-SM-5A5JV 60-69 years, female 22.4
GTEX-147F4-2826-SM-5NQBN 50-59 years, male 22.1
GTEX-S341-1526-SM-4AD6K 40-49 years, female 21.4
GTEX-11EI6-0626-SM-5985T 60-69 years, male 20.5
GTEX-1269C-2426-SM-5FQSN 60-69 years, female 20.2
GTEX-13FHO-0826-SM-5L3E8 60-69 years, male 20.1
GTEX-QDT8-0626-SM-48TYW 30-39 years, female 19.6
GTEX-1313W-0826-SM-5EQ4T 50-59 years, female 18.9
GTEX-T6MN-0726-SM-32PML 50-59 years, male 18.3
GTEX-13O3O-0826-SM-5K7WE 60-69 years, female 18.0
GTEX-X15G-1626-SM-3NMB3 50-59 years, female 17.6
GTEX-Y111-2026-SM-4SOJA 50-59 years, male 17.3
GTEX-ZU9S-1926-SM-5NQBP 30-39 years, male 17.0
GTEX-Q2AG-0326-SM-48U1O 40-49 years, female 16.9
GTEX-ZAJG-0626-SM-5HL8X 50-59 years, female 16.6
GTEX-XUZC-1626-SM-4BRVP 30-39 years, female 15.9
GTEX-RU72-0626-SM-46MUI 50-59 years, female 15.6
GTEX-13CF2-2026-SM-5K7VI 60-69 years, male 15.3
GTEX-14AS3-1626-SM-5S2OY 40-49 years, female 15.0
GTEX-11GS4-2126-SM-5A5KR 60-69 years, male 14.4
GTEX-ZEX8-2226-SM-57WC6 50-59 years, male 14.4
GTEX-139T8-0826-SM-5L3DE 60-69 years, male 14.0
GTEX-WYVS-1726-SM-3NMAY 40-49 years, female 13.6
GTEX-T5JC-2126-SM-32PMO 20-29 years, male 13.4
GTEX-SIU7-1626-SM-4BRUK 50-59 years, male 13.3
GTEX-W5X1-2326-SM-3GIL6 40-49 years, female 13.3
GTEX-XOT4-0726-SM-4GIAW 60-69 years, female 13.1
GTEX-11WQC-1726-SM-5GU4W 60-69 years, male 12.4
GTEX-11DXW-0626-SM-5N9ER 40-49 years, male 12.2
GTEX-13PL6-2926-SM-5L3I2 40-49 years, female 11.4
GTEX-U3ZH-1426-SM-4DXSR 30-39 years, male 11.0
GTEX-131YS-0626-SM-5EGKL 60-69 years, female 9.7
GTEX-X4EP-2926-SM-3P5YQ 60-69 years, female 9.5
GTEX-13O3P-0826-SM-5L3DH 50-59 years, male 9.3
GTEX-12ZZX-1126-SM-5EGKB 40-49 years, female 8.7
GTEX-VUSG-2226-SM-4KKZO 50-59 years, male 8.7
GTEX-13NZ9-1026-SM-5MR5K 50-59 years, male 7.7
GTEX-R3RS-0626-SM-48FE1 40-49 years, female 7.7
GTEX-11PRG-0826-SM-5EQ6A 50-59 years, male 7.6
GTEX-14ABY-2126-SM-5QGQZ 50-59 years, male 7.6
GTEX-13FTY-2226-SM-5J1ND 40-49 years, female 7.0
GTEX-T2IS-1526-SM-32QPR 20-29 years, female 6.2
GTEX-YFC4-1426-SM-5IFJG 40-49 years, female 5.7
GTEX-ZF2S-2026-SM-5E461 50-59 years, female 5.2
GTEX-ZC5H-2626-SM-5J2MG 40-49 years, female 5.1
GTEX-131XW-0726-SM-5EGK3 50-59 years, female 4.8
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

170.4

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 170.4
FF:10080-102A8 77 years, female 170.4

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