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TPK1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:6.4TPM
GTEx:1.4RPKM
FANTOM5:13.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA021545

  

Antibody HPA021849

  

Endothelial cells

 Low   Medium  

Glandular cells

 High   High  

Peripheral nerve/ganglion

 Medium   Low  
   
   

COLON - HPA RNA-seq

Average TPM

6.4
overview Male, age 54 Sample 1
TPM: 10.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 7.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 7.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 3.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 5.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 3.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 4.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 6.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 10.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 6.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 8.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 4.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 4.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

1.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 1.0
Samples: 149

Max RPKM: 1.9
Min RPKM: 0.5
Std RPKM: 0.2
Median RPKM: 1.0
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 1.9
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 1.9
GTEX-1211K-1826-SM-5EGJ2 60-69 years, female 1.8
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 1.8
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 1.7
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 1.6
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 1.6
GTEX-Y114-1626-SM-4TT7I 50-59 years, female 1.6
GTEX-13111-1926-SM-5GCOL 50-59 years, male 1.5
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 1.5
Show all
Colon - Transverse
RPKM: 1.7
Samples: 196

Max RPKM: 5.4
Min RPKM: 0.5
Std RPKM: 0.7
Median RPKM: 1.5
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 5.4
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 5.0
GTEX-QV31-0826-SM-4R1KR 30-39 years, male 4.1
GTEX-XUZC-1326-SM-4BRV2 30-39 years, female 3.7
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 3.3
GTEX-1128S-1626-SM-5H12O 60-69 years, female 3.2
GTEX-144GN-1126-SM-5LU33 50-59 years, male 3.2
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 3.1
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 3.1
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 3.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

13.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 13.8
FF:10014-101C5 62,83,84 years, mixed 13.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.