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CACNA1H

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:7.3TPM
GTEx:41.7RPKM
FANTOM5:31.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA039125

  

Endothelial cells

 Low  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Low  
 
 
 

COLON - HPA RNA-seq

Average TPM

7.3
overview Male, age 54 Sample 1
TPM: 9.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 5.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 2.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 12.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 4.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 13.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 1.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 1.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 10
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 6.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 12.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 12.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

41.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 61.8
Samples: 149

Max RPKM: 101.9
Min RPKM: 7.6
Std RPKM: 18.9
Median RPKM: 64.6
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 101.9
GTEX-XUJ4-2126-SM-4BOOX 60-69 years, female 101.8
GTEX-13QBU-2026-SM-5KLZB 40-49 years, female 97.3
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 96.5
GTEX-13O61-1526-SM-5KM3P 60-69 years, male 96.5
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 94.9
GTEX-13FTW-2126-SM-5K7YG 40-49 years, male 94.4
GTEX-WYVS-1126-SM-4SOJX 40-49 years, female 90.9
GTEX-ZP4G-1526-SM-57WE5 20-29 years, female 90.9
GTEX-XQ8I-2326-SM-4BOQC 50-59 years, male 90.7
Show all
Colon - Transverse
RPKM: 26.4
Samples: 196

Max RPKM: 83.9
Min RPKM: 1.8
Std RPKM: 23.3
Median RPKM: 18.6
GTEX-Y114-1526-SM-4TT79 50-59 years, female 83.9
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 82.8
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 81.9
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 80.9
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 77.7
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 77.6
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 77.1
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 76.6
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 76.1
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 76.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

31.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 31.6
FF:10014-101C5 62,83,84 years, mixed 31.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.