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SND1

GENERAL INFORMATION

Gene name

 SND1

Gene description

 Staphylococcal nuclease and tudor domain containing 1

Protein class

 Cancer-related genes
Plasma proteins
Predicted intracellular proteins

Predicted localization

 Intracellular

Number of transcripts

 2
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category
HPA:Expressed in all
GTEx:Expressed in all
FANTOM5:Expressed in all

Protein evidence

 Evidence at protein level

Protein expression

 Ubiquitous cytoplasmic expression at variable levels.

DATA RELIABILITY

Data reliability
description

 Antibody staining mainly consistent with RNA expression data.

Reliability score

 Supported based on 3 antibodies.
HPA002529 , HPA002632 , CAB019323
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RNA AND PROTEIN EXPRESSION SUMMARY
RNA expression (TPM) Protein expression (score)
Brain
Caudate
N/A
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Bronchus
N/A
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Vagina
N/A
Adipose & soft tissue
Skin
Cerebral cortex

Lymph node

Liver

Pancreas

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW
Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all

GENE INFORMATION

Gene name

 SND1 (HGNC Symbol)

Synonyms

 p100, TDRD11

Description

 Staphylococcal nuclease and tudor domain containing 1 (HGNC Symbol)

Entrez gene summary

Chromosome

 7

Cytoband

 q32.1

Chromosome location (bp)

 127652180 - 128092609

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000197157 (version 83.38)

Entrez gene

 27044

UniProt

 Q7KZF4 (UniProt - Evidence at protein level)

neXtProt

 NX_Q7KZF4

Antibodypedia

 SND1 antibodies

PROTEIN BROWSER
SND1-001
SND1-016

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
SND1-001
ENSP00000346762
ENST00000354725
Q7KZF4 [Direct mapping]
Staphylococcal nuclease domain-containing protein 1
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Predicted intracellular proteins
Plasma proteins
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
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GO:0001649 [osteoblast differentiation]
GO:0003676 [nucleic acid binding]
GO:0003712 [transcription cofactor activity]
GO:0004518 [nuclease activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0006351 [transcription, DNA-templated]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0016020 [membrane]
GO:0016032 [viral process]
GO:0016442 [RISC complex]
GO:0031047 [gene silencing by RNA]
GO:0042470 [melanosome]
GO:0044822 [poly(A) RNA binding]
GO:0070062 [extracellular exosome]
GO:0090305 [nucleic acid phosphodiester bond hydrolysis]
GO:0097433 [dense body]
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 910 aa
102 kDa 		No 0
SND1-016
ENSP00000419327
ENST00000486037
H7C597 [Direct mapping]
Staphylococcal nuclease domain-containing protein 1
Show all
Predicted intracellular proteins
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Ezkurdia et al 2014)
Show all
 231 aa
26.2 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.