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SERPINA1

COLON - Expression summary

Protein expression
N/A

RNA expression
HPA:144.2TPM
GTEx:10.3RPKM
FANTOM5:622.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not available
Glandular cells:Not available
Peripheral nerve/ganglion:Not available
 

Antibody staining

Antibody HPA000927

  

Antibody CAB013211

  

Antibody CAB016648

  

Antibody CAB073396

  

Endothelial cells

 Not detected   Not detected   High   High  

Glandular cells

 Not detected   Medium   Not detected   Not detected  

Peripheral nerve/ganglion

 Not detected   Not detected   Low   Not detected  
       
       
       

COLON - HPA RNA-seq

Average TPM

144.2
overview Male, age 54 Sample 1
TPM: 401.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 149.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 149.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 48.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 133.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 61.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 103.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 83
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 157.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 159.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 283.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 57.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 86.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

10.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 1.6
Samples: 149

Max RPKM: 16.1
Min RPKM: 0.0
Std RPKM: 2.2
Median RPKM: 0.8
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 16.1
GTEX-ZPIC-2626-SM-57WE2 40-49 years, female 12.4
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 9.7
GTEX-XBED-1726-SM-47JYO 60-69 years, male 9.6
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 8.0
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 6.3
GTEX-1211K-1826-SM-5EGJ2 60-69 years, female 5.4
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 5.2
GTEX-WFG8-1726-SM-4LVM6 20-29 years, male 4.4
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 4.2
Show all
Colon - Transverse
RPKM: 16.9
Samples: 196

Max RPKM: 112.0
Min RPKM: 0.1
Std RPKM: 15.8
Median RPKM: 13.9
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 112.0
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 66.7
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 62.6
GTEX-144GN-1126-SM-5LU33 50-59 years, male 56.9
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 54.4
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 50.6
GTEX-XUZC-1326-SM-4BRV2 30-39 years, female 50.0
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 44.0
GTEX-QCQG-1626-SM-48U26 50-59 years, female 43.4
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 41.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

622.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 622.4
FF:10014-101C5 62,83,84 years, mixed 622.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.