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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:1181.2TPM
GTEx:465.7RPKM
FANTOM5:1206.6Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA004426

  

Antibody CAB004647

  

Adipocytes

 Not detected   Medium  

Fibroblasts

 Medium  

Peripheral nerve

 Medium  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:High
Fibroblasts:Medium
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA004426

  

Antibody CAB004647

  

Adipocytes

 High   Medium  

Fibroblasts

 Medium   Medium  

Peripheral nerve

 Medium  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

1181.2
N/A Female, age 80 Sample 1
TPM: 988.8
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 1015.6
N/A Female, age 57 Sample 3
TPM: 901.7
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 1240.6
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 1759.1
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

465.7

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 489.8
Samples: 350

Max RPKM: 1651.8
Min RPKM: 274.9
Std RPKM: 145.5
Median RPKM: 463.3
GTEX-111VG-2326-SM-5N9BK 60-69 years, male 1651.8
GTEX-13NYS-0226-SM-5MR49 60-69 years, male 1298.1
GTEX-13YAN-0426-SM-5O9DR 60-69 years, male 1024.6
GTEX-11GSO-2326-SM-5A5LX 60-69 years, male 1014.9
GTEX-11UD1-0226-SM-5EQKL 40-49 years, female 969.5
GTEX-XMD2-0226-SM-4WWEE 60-69 years, female 955.9
GTEX-139TU-0226-SM-5J1NM 60-69 years, male 924.2
GTEX-13FHO-0326-SM-5IJBH 60-69 years, male 857.9
GTEX-Q734-1826-SM-2I3EL 40-49 years, female 845.8
GTEX-13NZA-0126-SM-5K7UH 60-69 years, male 837.2
Show all
Adipose - Visceral (Omentum)
RPKM: 428.4
Samples: 227

Max RPKM: 791.2
Min RPKM: 199.8
Std RPKM: 103.1
Median RPKM: 418.1
GTEX-13X6I-1526-SM-5SIAC 60-69 years, male 791.2
GTEX-13O3P-0926-SM-5IFFI 50-59 years, male 786.0
GTEX-13FHO-2026-SM-5J1OA 60-69 years, male 742.7
GTEX-132AR-0526-SM-5J2MJ 50-59 years, female 720.3
GTEX-ZTPG-2326-SM-57WFL 20-29 years, female 669.0
GTEX-13X6H-1726-SM-5Q5EH 50-59 years, female 668.1
GTEX-146FH-2026-SM-5SI9I 50-59 years, female 657.6
GTEX-13PL7-1226-SM-5SIAR 60-69 years, female 650.6
GTEX-XYKS-1826-SM-4E3JV 60-69 years, female 648.9
GTEX-UPK5-1826-SM-3GAEB 40-49 years, male 648.3
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

1206.6

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 1206.6
FF:10010-101C1 65,65,76 years, mixed 1206.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.