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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:823.7TPM
GTEx:390.7RPKM
FANTOM5:610.5Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Glandular cells:High
Myoepithelial cells:Medium
Adipocytes:Low
 

Antibody staining

Antibody HPA004426

 

Antibody CAB004647

 

Glandular cells

High   High  

Myoepithelial cells

Medium   Medium  

Adipocytes

Low  
   
   
   

BREAST - HPA RNA-seq

Average TPM

823.7

overview Female, age 52 Sample 1
TPM: 777.1
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80 Sample 2
TPM: 1021.1
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47 Sample 3
TPM: 641.4
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38 Sample 4
TPM: 855.1
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

390.7

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 390.7
Samples: 214

Max RPKM: 858.1
Min RPKM: 197.5
Std RPKM: 81.3
Median RPKM: 382.6
GTEX-11ONC-2126-SM-5HL6E 60-69 years, male 858.1
GTEX-139TU-0626-SM-5KM3X 60-69 years, male 685.4
GTEX-11ZUS-0826-SM-5FQUY 30-39 years, male 608.8
GTEX-11GSO-1926-SM-5A5K3 60-69 years, male 602.8
GTEX-12WSK-2226-SM-5GCO5 40-49 years, female 566.6
GTEX-XUZC-1626-SM-4BRVP 30-39 years, female 561.7
GTEX-13FTW-1426-SM-5LZWZ 40-49 years, male 550.3
GTEX-13N1W-0626-SM-5MR4U 70-79 years, male 547.2
GTEX-XYKS-1326-SM-4BRUN 60-69 years, female 545.8
GTEX-XBED-1626-SM-47JYN 60-69 years, male 536.5
GTEX-ZVT4-1026-SM-57WC4 50-59 years, female 521.0
GTEX-132AR-0826-SM-5EGK6 50-59 years, female 517.8
GTEX-SIU7-1626-SM-4BRUK 50-59 years, male 510.4
GTEX-S341-1526-SM-4AD6K 40-49 years, female 495.6
GTEX-1122O-1226-SM-5H113 60-69 years, female 492.9
GTEX-117YX-1426-SM-5H12H 50-59 years, male 491.7
GTEX-T6MN-0726-SM-32PML 50-59 years, male 491.7
GTEX-XUJ4-1926-SM-4BOOV 60-69 years, female 490.4
GTEX-ZF2S-2026-SM-5E461 50-59 years, female 490.0
GTEX-132NY-0826-SM-5K7Y7 60-69 years, male 488.6
GTEX-13D11-1026-SM-5IJFB 50-59 years, female 488.6
GTEX-S33H-0326-SM-4AD6N 30-39 years, male 487.4
GTEX-VUSG-2226-SM-4KKZO 50-59 years, male 487.4
GTEX-Y3I4-1526-SM-4TT7K 50-59 years, male 487.4
GTEX-147F4-2826-SM-5NQBN 50-59 years, male 486.4
GTEX-Y114-2026-SM-4TT7L 50-59 years, female 485.9
GTEX-ZZPU-0626-SM-5E43T 50-59 years, female 483.9
GTEX-YFCO-1826-SM-4W1YH 40-49 years, male 476.0
GTEX-11WQC-1726-SM-5GU4W 60-69 years, male 474.5
GTEX-13NZ9-1026-SM-5MR5K 50-59 years, male 474.1
GTEX-U3ZN-1926-SM-4DXSG 30-39 years, female 473.6
GTEX-ZPIC-1126-SM-5BC7F 40-49 years, female 469.5
GTEX-WFON-1826-SM-3GILG 40-49 years, male 465.5
GTEX-T5JC-2126-SM-32PMO 20-29 years, male 463.9
GTEX-ZVZQ-0826-SM-51MRF 60-69 years, female 463.8
GTEX-11OF3-1926-SM-59889 60-69 years, male 462.8
GTEX-139T6-1626-SM-5PNYZ 50-59 years, male 459.8
GTEX-1211K-1926-SM-5EQLB 60-69 years, female 459.2
GTEX-UJHI-1426-SM-3DB9C 50-59 years, female 458.9
GTEX-ZF29-1926-SM-5S2P1 60-69 years, female 454.8
GTEX-144GL-2026-SM-5LU3O 50-59 years, male 451.3
GTEX-13W46-0826-SM-5LU3H 50-59 years, male 450.3
GTEX-ZTX8-1226-SM-4YCE9 20-29 years, male 449.5
GTEX-13O61-1826-SM-5KM4I 60-69 years, male 448.1
GTEX-ZDTT-2126-SM-5S2OJ 60-69 years, male 447.8
GTEX-13O3P-0826-SM-5L3DH 50-59 years, male 445.8
GTEX-12WSN-1326-SM-5GCNT 40-49 years, male 445.6
GTEX-11NSD-0926-SM-5N9DR 20-29 years, male 445.0
GTEX-WY7C-2726-SM-3NB3P 50-59 years, male 442.4
GTEX-146FH-0826-SM-5SI8T 50-59 years, female 442.3
GTEX-131YS-0626-SM-5EGKL 60-69 years, female 441.9
GTEX-X4XY-0926-SM-4E3JD 60-69 years, male 441.7
GTEX-ZAB4-2526-SM-5HL8M 40-49 years, male 437.9
GTEX-ZA64-1526-SM-5CVMD 20-29 years, male 436.9
GTEX-11P7K-0726-SM-5EGKX 30-39 years, male 436.5
GTEX-11PRG-0826-SM-5EQ6A 50-59 years, male 436.1
GTEX-Y5V5-2126-SM-4WWFO 60-69 years, female 435.6
GTEX-ZYW4-0826-SM-5GIDG 60-69 years, male 433.1
GTEX-13O3O-0826-SM-5K7WE 60-69 years, female 431.1
GTEX-145MN-1926-SM-5SIAI 30-39 years, male 429.3
GTEX-145LT-0726-SM-5S2VM 40-49 years, male 429.1
GTEX-Y5V6-2126-SM-4WWFX 60-69 years, male 427.1
GTEX-11TUW-1826-SM-5BC5D 60-69 years, male 426.6
GTEX-S7SE-0826-SM-4AT4D 50-59 years, male 425.6
GTEX-ZU9S-1926-SM-5NQBP 30-39 years, male 424.5
GTEX-13O3Q-2226-SM-5KM4O 50-59 years, male 422.1
GTEX-YEC3-1026-SM-5IFI5 50-59 years, male 421.6
GTEX-ZXES-0826-SM-5E43C 30-39 years, female 421.2
GTEX-ZQUD-1926-SM-51MSA 30-39 years, male 419.4
GTEX-13N11-1726-SM-5J1OJ 50-59 years, female 417.5
GTEX-12BJ1-1826-SM-5HL9N 60-69 years, male 415.8
GTEX-ZY6K-1626-SM-5GZWV 50-59 years, male 415.0
GTEX-13S86-1226-SM-5S2OA 40-49 years, male 413.2
GTEX-ZDXO-0126-SM-5S2ND 60-69 years, male 413.2
GTEX-S4P3-1326-SM-4AD6V 50-59 years, female 409.4
GTEX-TKQ2-1826-SM-33HB2 50-59 years, male 408.6
GTEX-WYJK-1326-SM-3NB2T 50-59 years, male 407.8
GTEX-14ABY-2126-SM-5QGQZ 50-59 years, male 406.1
GTEX-RWS6-1926-SM-47JXY 60-69 years, female 405.7
GTEX-WXYG-2226-SM-4E3IM 50-59 years, female 405.4
GTEX-U3ZH-1426-SM-4DXSR 30-39 years, male 404.6
GTEX-11P81-1926-SM-5BC53 30-39 years, female 403.5
GTEX-TMMY-0726-SM-33HBE 40-49 years, female 400.7
GTEX-11NV4-2026-SM-5N9DG 60-69 years, male 400.4
GTEX-ZV6S-1826-SM-5NQ8D 40-49 years, female 399.1
GTEX-Y8E4-1626-SM-5S2MW 40-49 years, male 397.7
GTEX-QDT8-0626-SM-48TYW 30-39 years, female 396.8
GTEX-ZEX8-2226-SM-57WC6 50-59 years, male 396.7
GTEX-Y9LG-1426-SM-5IFJZ 30-39 years, male 396.3
GTEX-12KS4-0126-SM-5Q5A5 30-39 years, male 396.1
GTEX-WOFL-0826-SM-3MJG1 60-69 years, male 396.1
GTEX-117XS-1926-SM-5GICO 60-69 years, male 396.0
GTEX-ZC5H-2626-SM-5J2MG 40-49 years, female 395.0
GTEX-13FHO-0826-SM-5L3E8 60-69 years, male 394.6
GTEX-TML8-1226-SM-32QON 40-49 years, female 394.6
GTEX-ZDYS-1126-SM-5K7UB 50-59 years, male 393.7
GTEX-WYBS-0926-SM-3NM94 60-69 years, female 393.1
GTEX-13NZB-2126-SM-5MR4Y 30-39 years, male 393.0
GTEX-11EM3-1326-SM-5N9C6 20-29 years, female 392.7
GTEX-XQ3S-1326-SM-4BOPQ 20-29 years, male 390.7
GTEX-11EI6-0626-SM-5985T 60-69 years, male 390.3
GTEX-11EQ9-1826-SM-5Q5AJ 30-39 years, male 389.3
GTEX-13QIC-2326-SM-5LU5N 60-69 years, female 388.7
GTEX-ZVTK-0326-SM-51MRR 20-29 years, male 385.3
GTEX-Q2AG-0326-SM-48U1O 40-49 years, female 384.7
GTEX-13NZ8-0126-SM-5IJCT 60-69 years, female 383.6
GTEX-ZYWO-2326-SM-5GZY4 40-49 years, female 382.8
GTEX-11DXZ-1926-SM-5GZZL 50-59 years, male 382.3
GTEX-WRHU-0326-SM-3MJFY 50-59 years, female 380.8
GTEX-R53T-1526-SM-48FEK 50-59 years, female 379.0
GTEX-R55F-1726-SM-2TF4R 50-59 years, male 378.0
GTEX-131XW-0726-SM-5EGK3 50-59 years, female 377.3
GTEX-ZV7C-1826-SM-5NQ83 50-59 years, male 377.3
GTEX-ZYFC-0826-SM-5E44K 50-59 years, male 376.9
GTEX-X15G-1626-SM-3NMB3 50-59 years, female 376.2
GTEX-XV7Q-2326-SM-4BRVZ 40-49 years, female 374.0
GTEX-13113-1726-SM-5GCOO 60-69 years, female 373.4
GTEX-11LCK-2426-SM-5HL5F 30-39 years, male 372.1
GTEX-139T8-0826-SM-5L3DE 60-69 years, male 372.0
GTEX-ZYT6-0126-SM-5E45J 30-39 years, male 371.6
GTEX-11GS4-2126-SM-5A5KR 60-69 years, male 371.3
GTEX-ZQG8-0726-SM-5P9H9 60-69 years, female 371.2
GTEX-XUW1-2326-SM-4BOO5 50-59 years, female 369.4
GTEX-QMRM-1626-SM-4R1KV 50-59 years, male 368.7
GTEX-ZLV1-1426-SM-4WWES 60-69 years, female 368.7
GTEX-U412-1826-SM-4DXTJ 60-69 years, male 367.5
GTEX-X4EP-2926-SM-3P5YQ 60-69 years, female 367.0
GTEX-XOT4-0726-SM-4GIAW 60-69 years, female 366.2
GTEX-11DXY-2326-SM-5GICW 60-69 years, male 365.4
GTEX-TKQ1-0226-SM-33HB5 30-39 years, male 364.9
GTEX-ZUA1-1526-SM-59HLS 40-49 years, male 362.2
GTEX-T5JW-2026-SM-4DM63 20-29 years, female 361.9
GTEX-YJ8O-2226-SM-5IFHW 40-49 years, female 361.7
GTEX-VJWN-0726-SM-3GIJ8 50-59 years, female 360.2
GTEX-R3RS-0626-SM-48FE1 40-49 years, female 360.0
GTEX-1192X-2326-SM-5987X 50-59 years, male 359.1
GTEX-WI4N-1426-SM-3LK7H 40-49 years, female 358.8
GTEX-13W3W-1226-SM-5LU4H 60-69 years, female 358.5
GTEX-14E6E-1326-SM-5S2NR 30-39 years, male 358.2
GTEX-U8XE-0826-SM-4E3J1 30-39 years, male 357.8
GTEX-12WSB-0626-SM-59HJO 60-69 years, female 357.3
GTEX-11O72-2126-SM-5N9FO 40-49 years, male 357.0
GTEX-XMD2-0926-SM-4WWEF 60-69 years, female 356.4
GTEX-XMK1-1126-SM-4IHJ8 40-49 years, male 356.4
GTEX-1313W-0826-SM-5EQ4T 50-59 years, female 356.0
GTEX-W5X1-2326-SM-3GIL6 40-49 years, female 354.8
GTEX-1399U-1826-SM-5PNZ1 50-59 years, female 352.9
GTEX-Y3IK-2326-SM-4WWDT 50-59 years, female 349.4
GTEX-13PVQ-1026-SM-5KM3M 50-59 years, male 348.9
GTEX-11I78-2226-SM-5PNYA 50-59 years, female 348.4
GTEX-UPK5-2326-SM-3P5Z8 40-49 years, male 346.3
GTEX-R55D-0826-SM-48FEA 50-59 years, male 342.4
GTEX-13CF3-2126-SM-5IFJP 60-69 years, female 342.3
GTEX-WYVS-1726-SM-3NMAY 40-49 years, female 342.1
GTEX-XQ8I-2426-SM-4WAXY 50-59 years, male 342.0
GTEX-12WSM-1726-SM-5BC6J 60-69 years, male 341.9
GTEX-ZF3C-2326-SM-5S2MZ 50-59 years, female 340.1
GTEX-11ZTT-2326-SM-5EQLG 60-69 years, female 339.3
GTEX-11TT1-2126-SM-5GU5Y 20-29 years, male 338.0
GTEX-S4Q7-1126-SM-4AD6R 20-29 years, male 335.5
GTEX-YFC4-1426-SM-5IFJG 40-49 years, female 334.6
GTEX-ZAJG-0626-SM-5HL8X 50-59 years, female 332.7
GTEX-111YS-1926-SM-5GICC 60-69 years, male 331.2
GTEX-QVJO-1826-SM-447C9 60-69 years, female 331.2
GTEX-T6MO-0326-SM-32QOK 40-49 years, female 326.6
GTEX-1314G-1226-SM-5BC6D 30-39 years, male 324.6
GTEX-11EMC-2026-SM-5A5JV 60-69 years, female 322.1
GTEX-Y8LW-1626-SM-5IFHX 50-59 years, female 321.8
GTEX-14753-2426-SM-5LU8U 60-69 years, male 320.8
GTEX-ZT9W-2026-SM-51MRA 50-59 years, male 320.5
GTEX-11DXW-0626-SM-5N9ER 40-49 years, male 318.9
GTEX-S4UY-0726-SM-4AD6X 40-49 years, female 318.9
GTEX-145ME-1526-SM-5Q5F2 40-49 years, female 318.7
GTEX-1269C-2426-SM-5FQSN 60-69 years, female 318.2
GTEX-T2YK-2226-SM-32QPT 50-59 years, male 314.5
GTEX-ZTTD-1026-SM-51MRD 50-59 years, male 313.2
GTEX-14AS3-1626-SM-5S2OY 40-49 years, female 312.9
GTEX-1117F-2826-SM-5GZXL 60-69 years, female 311.9
GTEX-Y5LM-1726-SM-4VDSX 40-49 years, female 311.3
GTEX-X261-0626-SM-3NMD9 50-59 years, male 310.7
GTEX-ZWKS-2826-SM-5NQ74 30-39 years, male 310.0
GTEX-YB5K-1626-SM-5IFIN 40-49 years, female 308.8
GTEX-SE5C-2126-SM-4BRUJ 40-49 years, female 308.4
GTEX-13PL6-2926-SM-5L3I2 40-49 years, female 307.9
GTEX-133LE-1726-SM-5K7VQ 20-29 years, female 305.7
GTEX-RUSQ-2026-SM-4GIAK 50-59 years, male 305.7
GTEX-REY6-2426-SM-48FF5 60-69 years, male 305.2
GTEX-T2IS-1526-SM-32QPR 20-29 years, female 305.2
GTEX-ZLFU-2126-SM-4WWEV 40-49 years, male 304.4
GTEX-12ZZX-1126-SM-5EGKB 40-49 years, female 301.7
GTEX-RU72-0626-SM-46MUI 50-59 years, female 299.6
GTEX-QEL4-2126-SM-447AE 50-59 years, male 299.1
GTEX-11WQK-2426-SM-5GU5C 50-59 years, male 297.4
GTEX-13OW8-0226-SM-5K7UP 60-69 years, male 296.9
GTEX-13FTX-1126-SM-5N9EN 20-29 years, female 296.3
GTEX-ZVE2-1226-SM-5NQ8R 50-59 years, male 294.7
GTEX-13CF2-2026-SM-5K7VI 60-69 years, male 294.2
GTEX-XMD1-0826-SM-4AT52 60-69 years, male 291.0
GTEX-11P82-1326-SM-5HL62 20-29 years, male 288.8
GTEX-XGQ4-0926-SM-4AT4U 50-59 years, male 287.2
GTEX-S32W-2026-SM-4AD6E 50-59 years, female 287.0
GTEX-13FTY-2226-SM-5J1ND 40-49 years, female 285.4
GTEX-UTHO-1026-SM-3GAF7 60-69 years, male 284.7
GTEX-PSDG-1626-SM-48TCQ 50-59 years, male 279.7
GTEX-ZVT2-1826-SM-5NQ8W 50-59 years, female 278.8
GTEX-144GM-0926-SM-5O994 20-29 years, male 276.3
GTEX-13OW5-2226-SM-5L3HC 60-69 years, male 273.9
GTEX-QEG5-0726-SM-4R1JQ 20-29 years, male 271.2
GTEX-Y111-2026-SM-4SOJA 50-59 years, male 267.1
GTEX-145MO-0826-SM-5NQBL 60-69 years, male 265.7
GTEX-ZZ64-1226-SM-5E43R 20-29 years, male 263.9
GTEX-11DZ1-0326-SM-5N9BN 50-59 years, male 257.9
GTEX-YB5E-1726-SM-5IFJ3 40-49 years, male 253.7
GTEX-132Q8-1426-SM-5EGK7 60-69 years, male 197.5
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

610.5

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 610.5
FF:10080-102A8 77 years, female 610.5

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