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COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:653.0TPM
GTEx:285.7RPKM
FANTOM5:531.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
 

Antibody staining

Antibody HPA004426

  

Antibody CAB004647

  

Endothelial cells

 Medium   Medium  

Glandular cells

 High   High  
   
   

COLON - HPA RNA-seq

Average TPM

653.0
overview Male, age 54 Sample 1
TPM: 626.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 762.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 490.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 499.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 1080.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 700.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 642.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 511.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 762.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 509.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 739.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 636.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 525.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

285.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 278.1
Samples: 149

Max RPKM: 422.0
Min RPKM: 167.9
Std RPKM: 50.7
Median RPKM: 270.3
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 422.0
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 415.2
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 411.7
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 402.4
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 402.2
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 394.0
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 385.2
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 383.1
GTEX-Y114-1626-SM-4TT7I 50-59 years, female 376.1
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 372.8
Show all
Colon - Transverse
RPKM: 291.5
Samples: 196

Max RPKM: 829.1
Min RPKM: 166.2
Std RPKM: 74.6
Median RPKM: 282.0
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 829.1
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 571.7
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 521.6
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 469.2
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 445.6
GTEX-11EM3-1526-SM-5A5KN 20-29 years, female 435.1
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 427.4
GTEX-145ME-0826-SM-5O9AF 40-49 years, female 422.2
GTEX-117YX-0826-SM-5H11J 50-59 years, male 421.5
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 417.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

531.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 531.5
FF:10014-101C5 62,83,84 years, mixed 531.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.