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YTHDF2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:31.5TPM
GTEx:15.6RPKM
FANTOM5:63.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA059621

  

Endothelial cells

 Medium  

Glandular cells

 High  

Peripheral nerve/ganglion

 High  
 
 

COLON - HPA RNA-seq

Average TPM

31.5
overview Male, age 54 Sample 1
TPM: 29.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 22.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 27
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 30.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 18.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 33.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 37.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 42.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 33.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 34.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 35
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 35.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 29.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

15.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 13.6
Samples: 149

Max RPKM: 21.6
Min RPKM: 7.1
Std RPKM: 2.9
Median RPKM: 13.7
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 21.6
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 20.0
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 19.5
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 19.2
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 18.7
GTEX-1122O-1426-SM-5H11R 60-69 years, female 18.2
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 18.0
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 17.9
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 17.9
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 17.9
Show all
Colon - Transverse
RPKM: 17.1
Samples: 196

Max RPKM: 26.4
Min RPKM: 9.0
Std RPKM: 3.2
Median RPKM: 17.5
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 26.4
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 24.6
GTEX-133LE-1526-SM-5IFEN 20-29 years, female 24.2
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 23.1
GTEX-144GN-1126-SM-5LU33 50-59 years, male 22.9
GTEX-ZPU1-1926-SM-57WDT 40-49 years, male 22.5
GTEX-S4Q7-0826-SM-4AD5E 20-29 years, male 22.3
GTEX-144GM-1226-SM-5LU52 20-29 years, male 22.2
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 22.1
GTEX-WFG7-1526-SM-4LVMG 20-29 years, male 22.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

63.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 63.2
FF:10014-101C5 62,83,84 years, mixed 63.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.