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DDX39B

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:18.1TPM
GTEx:1.9RPKM
FANTOM5:257.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA055334

  

Antibody HPA058450

  

Antibody CAB034012

  

Endothelial cells

 Not detected   Low   High  

Glandular cells

 Low   Low   High  

Peripheral nerve/ganglion

 Medium   High  
     
     
     

COLON - HPA RNA-seq

Average TPM

18.1
overview Male, age 54 Sample 1
TPM: 5.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 39.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 20.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 9.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 29.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 25.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 32.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 6.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 23.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 5.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 26.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 3.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 5.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

1.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 1.9
Samples: 149

Max RPKM: 4.5
Min RPKM: 0.4
Std RPKM: 0.5
Median RPKM: 1.9
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 4.5
GTEX-12KS4-2326-SM-5EGJB 30-39 years, male 3.4
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 3.4
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 3.4
GTEX-ZZ64-0826-SM-5E449 20-29 years, male 3.2
GTEX-13U4I-2626-SM-5SI9C 40-49 years, female 3.1
GTEX-117YX-0526-SM-5EGJH 50-59 years, male 2.8
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 2.8
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 2.8
GTEX-XUJ4-2126-SM-4BOOX 60-69 years, female 2.8
Show all
Colon - Transverse
RPKM: 2.0
Samples: 196

Max RPKM: 3.7
Min RPKM: 0.5
Std RPKM: 0.5
Median RPKM: 2.0
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 3.7
GTEX-XQ8I-2126-SM-4BOOM 50-59 years, male 3.7
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 3.3
GTEX-131XE-0826-SM-5HL9W 50-59 years, male 3.1
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 3.0
GTEX-ZYWO-1626-SM-5E44H 40-49 years, female 3.0
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 2.9
GTEX-11EQ9-1426-SM-5987G 30-39 years, male 2.8
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 2.8
GTEX-QEL4-1926-SM-4R1JI 50-59 years, male 2.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

257.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 257.5
FF:10014-101C5 62,83,84 years, mixed 257.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.