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MT-CO2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:26655.5TPM
GTEx:24966.5RPKM
FANTOM5:165.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA051505

  

Antibody HPA054758

  

Antibody CAB016243

  

Endothelial cells

 Medium   Medium   Medium  

Glandular cells

 High   High   High  

Peripheral nerve/ganglion

 High   Medium   High  
     
     
     

COLON - HPA RNA-seq

Average TPM

26655.5
overview Male, age 54 Sample 1
TPM: 20580.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 10877.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 18011.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 25951.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 13165
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 27664.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 39364.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 37219.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 26780.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 26341.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 26804.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 31861.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 41901.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

24966.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 16417.8
Samples: 149

Max RPKM: 79522.5
Min RPKM: 5425.1
Std RPKM: 7383.1
Median RPKM: 15615.7
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 79522.5
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 34752.4
GTEX-13CF2-1826-SM-5N9GK 60-69 years, male 31636.1
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 28268.6
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 27326.5
GTEX-13FTW-2126-SM-5K7YG 40-49 years, male 27009.9
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 26867.3
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 26294.7
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 25700.3
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 25637.9
Show all
Colon - Transverse
RPKM: 31465.2
Samples: 196

Max RPKM: 77632.8
Min RPKM: 3753.2
Std RPKM: 15071.1
Median RPKM: 30671.6
GTEX-Y9LG-1526-SM-4WWDR 30-39 years, male 77632.8
GTEX-XBEW-1926-SM-4SOJO 40-49 years, male 75654.0
GTEX-11LCK-2026-SM-5A5MA 30-39 years, male 73911.3
GTEX-13QBU-1826-SM-5IJG3 40-49 years, female 69537.6
GTEX-11DXZ-1726-SM-5H12M 50-59 years, male 68205.6
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 65652.2
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 62813.4
GTEX-1211K-1726-SM-5FQUJ 60-69 years, female 59701.1
GTEX-13111-0726-SM-5DUVE 50-59 years, male 58427.8
GTEX-YF7O-1726-SM-5IFJ9 50-59 years, male 57752.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

165.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 165.6
FF:10014-101C5 62,83,84 years, mixed 165.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.