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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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PATHOLOGY ATLAS MELANOMA

GENE/PROTEIN

Antibody validation

Dictionary

Melanoma

MELANOMA - Survival analysis

Best separation

Median separation

Expression cutoff

46.2 FPKM 48.9 FPKM

3-year survival high

0% 0%

3-year survival low

38% 39%

Log-rank P value

3.07e-1 7.54e-1

Interactive survival scatter plot (individual patient data)




Stage:



TCGA RNA samples

Average FPKM

53.7

Number of samples

102

Samples

Sample

Description

FPKM

TCGA-BF-A5ER-01A 63 years, male, white, stage:iic 155.0
TCGA-EB-A24D-01A 72 years, male, white, stage:iiib 111.0
TCGA-EB-A82C-01A 70 years, female, asian, stage:iic 109.1
TCGA-FS-A1ZN-01A 43 years, male, white, stage:iiia 96.0
TCGA-IH-A3EA-01A 61 years, male, white, stage:iic 96.0
TCGA-YG-AA3N-01A 67 years, male, stage:iic 93.8
TCGA-BF-A1PV-01A 74 years, female, white, stage:iic 85.4
TCGA-FR-A726-01A 90 years, male, white, stage:iic 85.0
TCGA-BF-A1Q0-01A 80 years, male, white, stage:iic 84.7
TCGA-D9-A4Z5-01A 68 years, male, white, stage:iib 84.0
TCGA-FR-A3R1-01A 69 years, male, white, stage:iic 83.1
TCGA-ER-A194-01A 77 years, male, white 80.1
TCGA-EB-A85J-01A 66 years, female, white, stage:iib 77.9
TCGA-BF-AAP1-01A 86 years, male, white, stage:iic 77.6
TCGA-GF-A2C7-01A 48 years, male, white, stage:iic 75.2
TCGA-EB-A4OY-01A 65 years, female, white, stage:iiib 74.6
TCGA-EB-A5SE-01A 73 years, male, white, stage:iib 72.4
TCGA-BF-AAP4-01A 61 years, male, white, stage:iic 71.7
TCGA-BF-A9VF-01A 77 years, male, white, stage:iic 71.2
TCGA-BF-AAP2-01A 62 years, male, white, stage:iib 70.0
TCGA-HR-A5NC-01A 90 years, female 68.7
TCGA-EB-A4IQ-01A 42 years, female, asian, stage:iiib 68.0
TCGA-BF-A1PU-01A 46 years, female, white, stage:iic 68.0
TCGA-EB-A431-01A 34 years, male, white, stage:iic 66.9
TCGA-EB-A5SF-01A 78 years, female, white, stage:iic 66.2
TCGA-BF-A3DL-01A 84 years, female, white, stage:iiib 66.1
TCGA-EB-A5UM-01A 48 years, female, white, stage:iic 65.8
TCGA-EB-A57M-01A 56 years, male, asian, stage:iiib 65.5
TCGA-ER-A2NF-01A 53 years, male, white, stage:iiib 64.1
TCGA-ER-A19T-01A 51 years, male, white, stage:iv 63.2
TCGA-EB-A3Y7-01A 86 years, female, white, stage:iiib 63.0
TCGA-BF-A5EP-01A 75 years, female, white, stage:iiic 62.6
TCGA-BF-A5EQ-01A 63 years, male, white, stage:iic 60.9
TCGA-BF-AAOX-01A 83 years, male, white, stage:iic 60.0
TCGA-XV-A9VZ-01A 90 years, female, white, stage:ii 59.3
TCGA-BF-A1PZ-01A 71 years, female, white, stage:iib 58.4
TCGA-EB-A5FP-01A 65 years, female, white, stage:iv 57.5
TCGA-EB-A24C-01A 56 years, male, white 56.5
TCGA-EB-A3HV-01A 37 years, male, white, stage:iic 55.1
TCGA-GN-A8LN-01A 68 years, male, white, stage:iic 54.2
TCGA-EB-A41B-01A 76 years, female, white, stage:iic 53.7
TCGA-EB-A4IS-01A 77 years, male, white, stage:iib 53.6
TCGA-EB-A97M-01A 66 years, male, white, stage:iic 53.1
TCGA-D9-A4Z3-01A 73 years, female, white, stage:iiic 51.6
TCGA-FR-A2OS-01A 49 years, female, white, stage:iic 51.2
TCGA-ER-A19K-01A 79 years, female, white, stage:iic 50.9
TCGA-EB-A44O-01A 69 years, male, white, stage:iib 50.3
TCGA-EB-A41A-01A 90 years, male, white, stage:iic 49.4
TCGA-EB-A42Y-01A 73 years, female, asian, stage:iic 49.2
TCGA-EB-A3XF-01A 57 years, male, white, stage:iic 49.1
TCGA-BF-A3DM-01A 63 years, male, white, stage:iia 49.1
TCGA-EB-A4P0-01A 82 years, male, white, stage:iic 48.6
TCGA-EB-A51B-01A 53 years, male, white, stage:iic 48.2
TCGA-BF-A1PX-01A 56 years, male, white, stage:iiib 48.0
TCGA-EB-A1NK-01A 48 years, male, white, stage:iic 47.5
TCGA-EB-A551-01A 78 years, female, white, stage:iiic 47.4
TCGA-BF-AAP8-01A 58 years, male, white, stage:iic 47.4
TCGA-EB-A44N-01A 59 years, male, white, stage:iic 47.0
TCGA-D9-A3Z4-01A 54 years, male, white, stage:iiic 47.0
TCGA-BF-A3DN-01A 81 years, female, white, stage:iiic 46.5
TCGA-EB-A82B-01A 58 years, female, asian, stage:iii 46.3
TCGA-ER-A42H-01A 77 years, male, white 46.2
TCGA-ER-A196-01A 64 years, female, white, stage:iic 46.1
TCGA-EB-A44P-01A 58 years, female, white, stage:iic 44.4
TCGA-BF-A5EO-01A 65 years, male, white, stage:iic 44.2
TCGA-EB-A6QZ-01A 76 years, female, white, stage:iia 43.4
TCGA-BF-AAP7-01A 76 years, female, white, stage:iic 42.5
TCGA-EB-A3XD-01A 53 years, female, white, stage:iic 41.7
TCGA-XV-AAZY-01A 76 years, female, white, stage:iiic 41.4
TCGA-D9-A4Z2-01A 50 years, male, white, stage:iiic 41.2
TCGA-BF-A5ES-01A 76 years, female, white, stage:iic 41.0
TCGA-XV-A9W2-01A 81 years, male, white, stage:i 40.2
TCGA-EB-A3Y6-01A 56 years, female, white, stage:iic 39.7
TCGA-EB-A5VU-01A 56 years, male, asian, stage:iiib 39.4
TCGA-D3-A5GT-01A 43 years, male, white, stage:iiic 39.1
TCGA-WE-A8K4-01A 85 years, male, white, stage:iib 38.8
TCGA-EB-A3XB-01A 63 years, male, white, stage:ii 38.5
TCGA-EB-A3XC-01A 74 years, male, white, stage:iic 38.1
TCGA-FW-A5DX-01A 71 years, male, white, stage:iiic 38.1
TCGA-GN-A4U5-01A 61 years, female, white, stage:ib 38.1
TCGA-EB-A6R0-01A 58 years, female, white, stage:iic 38.0
TCGA-EB-A4XL-01A 56 years, female, white, stage:iic 37.5
TCGA-EB-A85I-01A 66 years, male, white, stage:iic 36.9
TCGA-EB-A42Z-01A 49 years, male, asian, stage:iiic 36.9
TCGA-DA-A960-01A 73 years, male, white, stage:iib 35.8
TCGA-BF-AAOU-01A 73 years, female, white, stage:iic 35.7
TCGA-FR-A728-01A 54 years, female, white, stage:iiib 34.9
TCGA-EB-A4OZ-01A 42 years, female, white, stage:iiic 34.6
TCGA-XV-A9W5-01A 51 years, male, white, stage:i/ii nos 33.8
TCGA-XV-AAZW-01A 62 years, female, white, stage:ii 33.4
TCGA-EB-A6QY-01A 71 years, male, white, stage:iic 32.2
TCGA-EB-A299-01A 63 years, male, white, stage:iia 32.2
TCGA-EB-A3XE-01A 77 years, female, white, stage:iia 31.6
TCGA-EB-A550-01A 75 years, female, white, stage:iic 30.5
TCGA-BF-A3DJ-01A 36 years, female, white, stage:iiib 30.2
TCGA-GF-A769-01A 39 years, male, white, stage:iic 29.0
TCGA-ER-A2NB-01A 57 years, male, white, stage:iiib 27.6
TCGA-XV-AAZV-01A 56 years, female, white, stage:ii 27.4
TCGA-EB-A553-01A 62 years, male, white, stage:iic 21.6
TCGA-BF-AAP6-01A 55 years, male, white, stage:iii 19.4
TCGA-GN-A26C-01A 77 years, male, white, stage:iiic 12.2
TCGA-GN-A263-01A 24 years, male, white, stage:iv 9.1
Show all

MELANOMA - Protein expression

 

Antibody HPA046791

Antibody CAB026383

 Antibody staining
  High
  Medium
  Low
  Not detected
   
 Intensity
  Strong
  Moderate
  Weak
  Negative
   
 Quantity
  >75%
  75%-25%
  <25%
  Rare
  Negative
   
 Location
  Cytoplasmic/membranous,nuclear
  Cytoplasmic/membranous
  Nuclear
  None
   

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