Cell atlas - TRIM31 - The Human Protein Atlas

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TRIM31

TISSUE

CELL

PATHOLOGY

CELL ATLAS RNA EXPRESSION

GENE/PROTEIN

Dictionary

Human cell

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GENERAL INFORMATION
Gene name	TRIM31
Gene description	Tripartite motif containing 31
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	1
	SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION
Summary
RNA cell category	Cell line enriched (RT4)
Protein evidence	Evidence at protein level
Main location	Not available

DATA RELIABILITY
Reliability score	Pending cell analysis.

ASSAYS

RNA EXPRESSION OVERVIEW
RNA cell line category: Cell line enriched (RT4) Organ Origin Category Expression Alphabetical Cell lines sorted after organ of phenotypic resemblance. Cell lines sorted after biological source for establishment. Cell lines sorted after the cell line category according to Cellosaurus. Cell lines sorted on descending RNA expression. Cell lines sorted alphabetically.

GENE INFORMATION
Gene name	TRIM31 (HGNC Symbol)
Synonyms	C6orf13, HCG1, HCGI, RNF
Description	Tripartite motif containing 31 (HGNC Symbol)
Entrez gene summary	The protein encoded by this gene is a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains, a RING, a B-box type 1 and a B-box type 2, and a coiled-coil region. The protein localizes to both the cytoplasm and the nucleus. Its function has not been identified. [provided by RefSeq, Jul 2008]
Chromosome	6
Cytoband	p22.1
Chromosome location (bp)	30102897 - 30113106
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000204616 (version 83.38)
Entrez gene	11074
UniProt	Q9BZY9 (UniProt - Evidence at protein level)
neXtProt	NX_Q9BZY9
Antibodypedia	TRIM31 antibodies

PROTEIN BROWSER

TRIM31-001

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
TRIM31-001 ENSP00000365924 ENST00000376734	Q9BZY9 [Direct mapping] E3 ubiquitin-protein ligase TRIM31 Q2L6J1 [Target identity:100%; Query identity:100%] Tripartite motif-containing 31; cDNA FLJ75322, highly similar to Homo sapiens tripartite motif-containing 31, transcript variant 1, mRNA Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005622 [intracellular] GO:0005739 [mitochondrion] GO:0005829 [cytosol] GO:0008270 [zinc ion binding] GO:0016567 [protein ubiquitination] GO:0016874 [ligase activity] GO:0019221 [cytokine-mediated signaling pathway] GO:0032897 [negative regulation of viral transcription] GO:0045087 [innate immune response] GO:0046597 [negative regulation of viral entry into host cell] GO:0051091 [positive regulation of sequence-specific DNA binding transcription factor activity] GO:0060333 [interferon-gamma-mediated signaling pathway] GO:1902186 [regulation of viral release from host cell] Show all	425 aa 48.2 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.