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PGA3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:47.1TPM
GTEx:0.2RPKM
FANTOM5:0.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA046875

  

Antibody CAB026358

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 Not detected   Not detected  

Peripheral nerve/ganglion

 Not detected   Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

47.1
overview Male, age 54 Sample 1
TPM: 28.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 171.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 368.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 2.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 38
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 0.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 0.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 0.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.1
Samples: 149

Max RPKM: 3.1
Min RPKM: 0.0
Std RPKM: 0.3
Median RPKM: 0.0
GTEX-ZQG8-2426-SM-57WEE 60-69 years, female 3.1
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 2.0
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 0.8
GTEX-ZE7O-2626-SM-51MSS 50-59 years, female 0.7
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 0.6
GTEX-11GS4-1826-SM-5HL4T 60-69 years, male 0.5
GTEX-V955-1726-SM-4JBHF 60-69 years, male 0.5
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 0.5
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 0.5
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 0.4
Show all
Colon - Transverse
RPKM: 0.3
Samples: 196

Max RPKM: 9.4
Min RPKM: 0.0
Std RPKM: 0.9
Median RPKM: 0.1
GTEX-XBED-1526-SM-4AT5W 60-69 years, male 9.4
GTEX-XUW1-1926-SM-4BOP1 50-59 years, female 6.4
GTEX-PX3G-1426-SM-48U1J 20-29 years, female 5.3
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 3.4
GTEX-RM2N-0926-SM-48FD1 50-59 years, male 1.6
GTEX-133LE-1526-SM-5IFEN 20-29 years, female 1.5
GTEX-11EM3-1526-SM-5A5KN 20-29 years, female 0.7
GTEX-11ONC-2026-SM-5HL61 60-69 years, male 0.7
GTEX-ZZ64-0726-SM-5GZX4 20-29 years, male 0.7
GTEX-11LCK-2026-SM-5A5MA 30-39 years, male 0.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

0.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 0.0
FF:10014-101C5 62,83,84 years, mixed 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.