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PGAM5

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:15.9TPM
GTEx:0.3RPKM
FANTOM5:14.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA036978

  

Antibody HPA036979

  

Antibody CAB068215

  

Endothelial cells

 Medium   Medium   Medium  

Glandular cells

 Medium   Medium   Medium  

Peripheral nerve/ganglion

 Medium  
     
     
     

COLON - HPA RNA-seq

Average TPM

15.9
overview Male, age 54 Sample 1
TPM: 15.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 15.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 23.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 19.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 15
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 18.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 12.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 13.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 12.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 16.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 15.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 18.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 9.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.3
Samples: 149

Max RPKM: 1.0
Min RPKM: 0.0
Std RPKM: 0.1
Median RPKM: 0.2
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 1.0
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 0.8
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 0.7
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 0.6
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 0.6
GTEX-XQ8I-2326-SM-4BOQC 50-59 years, male 0.6
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 0.6
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 0.6
GTEX-ZLV1-1326-SM-4WWER 60-69 years, female 0.6
GTEX-ZZ64-0826-SM-5E449 20-29 years, male 0.6
Show all
Colon - Transverse
RPKM: 0.4
Samples: 196

Max RPKM: 0.9
Min RPKM: 0.0
Std RPKM: 0.1
Median RPKM: 0.4
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 0.9
GTEX-S4Q7-0826-SM-4AD5E 20-29 years, male 0.9
GTEX-ZVP2-1526-SM-5NQ82 50-59 years, male 0.9
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 0.8
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 0.8
GTEX-PWCY-1026-SM-48TD4 20-29 years, female 0.8
GTEX-QMRM-1226-SM-447C6 50-59 years, male 0.8
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 0.8
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 0.8
GTEX-ZY6K-1226-SM-5GZYL 50-59 years, male 0.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

14.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 14.6
FF:10014-101C5 62,83,84 years, mixed 14.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.