Fields »
ABOUT
HELP
BLOG
HOXB7

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:12.9TPM
GTEx:6.6RPKM
FANTOM5:10.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Chondrocytes:Medium
Fibroblasts:Medium
 

Antibody staining

Antibody HPA049940

  

Adipocytes

 Medium  

Chondrocytes

 Medium  

Fibroblasts

 Medium  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
 
 

Antibody staining

Antibody HPA049940

  

Adipocytes

 Low  

Fibroblasts

 Low  
    
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

12.9
N/A Female, age 80 Sample 1
TPM: 20.5
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 12.6
N/A Female, age 57 Sample 3
TPM: 9.4
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 12.6
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 9.2
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

6.6

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 5.0
Samples: 350

Max RPKM: 17.3
Min RPKM: 1.3
Std RPKM: 2.0
Median RPKM: 4.6
GTEX-147GR-0426-SM-5S2OL 60-69 years, male 17.3
GTEX-13OW8-1226-SM-5K7XD 60-69 years, male 12.5
GTEX-12WSB-0226-SM-5GCOR 60-69 years, female 11.4
GTEX-POMQ-2326-SM-5S2VS 20-29 years, female 11.0
GTEX-13G51-2626-SM-5LZYW 60-69 years, male 10.9
GTEX-1399T-2726-SM-5K7XK 60-69 years, male 10.8
GTEX-Y5V6-2526-SM-5IFJV 60-69 years, male 10.8
GTEX-1269C-2726-SM-5EGJ4 60-69 years, female 10.6
GTEX-11WQC-2426-SM-5EQKQ 60-69 years, male 10.3
GTEX-ZE7O-0226-SM-5S2N1 50-59 years, female 10.0
Show all
Adipose - Visceral (Omentum)
RPKM: 9.1
Samples: 227

Max RPKM: 21.5
Min RPKM: 2.8
Std RPKM: 2.9
Median RPKM: 8.6
GTEX-12ZZX-1726-SM-5BC63 40-49 years, female 21.5
GTEX-ZXG5-1626-SM-59HJK 60-69 years, male 18.7
GTEX-139YR-0326-SM-5J1MC 50-59 years, male 16.5
GTEX-WK11-2426-SM-3NMAA 50-59 years, male 16.3
GTEX-131XG-0126-SM-5K7UJ 50-59 years, female 16.2
GTEX-145MF-1026-SM-5Q5EQ 50-59 years, male 15.8
GTEX-12WSI-1526-SM-5GCNM 50-59 years, male 15.2
GTEX-13NYS-0726-SM-5J1OR 60-69 years, male 15.0
GTEX-X585-2526-SM-4QAS1 50-59 years, male 15.0
GTEX-Y111-0926-SM-4SOIU 50-59 years, male 14.4
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

10.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 10.8
FF:10010-101C1 65,65,76 years, mixed 10.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.