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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:77.3TPM
GTEx:20.7RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Low
Neuropil:Not detected
 

Antibody staining

Antibody HPA047027

 

Antibody HPA055953

 

Endothelial cells

Not detected   Not detected  

Glial cells

Not detected   Not detected  

Neuronal cells

Not detected   Low  

Neuropil

Not detected   Not detected  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

77.3

N/A Male, age 5 Sample 1
TPM: 92.5
overview Female, age 40 Sample 2
TPM: 58.4
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70 Sample 3
TPM: 81.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

20.7

GTEx sample id

Sample description

RPKM

Brain - Cortex
RPKM: 18.1
Samples: 114

Max RPKM: 32.5
Min RPKM: 6.7
Std RPKM: 4.9
Median RPKM: 17.9
GTEX-11OC5-0726-SM-5P9JK 60-69 years, male 32.5
GTEX-X585-3026-SM-46MWF 50-59 years, male 31.4
GTEX-R55F-1326-SM-5S2V4 50-59 years, male 27.8
GTEX-11PRG-2926-SM-5987A 50-59 years, male 27.7
GTEX-12ZZX-2926-SM-5GCOQ 40-49 years, female 26.3
GTEX-13O3Q-2926-SM-5KM45 50-59 years, male 25.8
GTEX-13JUV-2926-SM-5LZX7 40-49 years, female 25.3
GTEX-13NYC-2826-SM-5K7WR 60-69 years, male 25.2
GTEX-13OVH-3026-SM-5MR4N 70-79 years, male 25.0
GTEX-117XS-3026-SM-5N9CA 60-69 years, male 24.7
GTEX-13NYS-3126-SM-5KLYV 60-69 years, male 24.7
GTEX-13SLX-3126-SM-5S2Q5 50-59 years, female 24.2
GTEX-144FL-3026-SM-5O99C 50-59 years, male 24.1
GTEX-1192X-3126-SM-5N9BY 50-59 years, male 24.0
GTEX-13OW6-3026-SM-5J2MI 50-59 years, male 23.9
GTEX-1313W-3126-SM-5LZUI 50-59 years, female 23.7
GTEX-13OVJ-2826-SM-5L3GW 50-59 years, female 23.5
GTEX-WHSE-3026-SM-3P5ZH 20-29 years, male 23.2
GTEX-YFC4-3126-SM-5PNV6 40-49 years, female 22.5
GTEX-XOTO-3026-SM-4B65M 50-59 years, male 22.4
GTEX-11EMC-3226-SM-5EGKW 60-69 years, female 22.2
GTEX-WWYW-3126-SM-3NB39 50-59 years, female 21.9
GTEX-11ZUS-2926-SM-5FQSL 30-39 years, male 21.7
GTEX-1399T-3026-SM-5KLZC 60-69 years, male 21.7
GTEX-145LS-3126-SM-5Q5BY 60-69 years, female 21.6
GTEX-13NYB-3026-SM-5IJD7 40-49 years, male 21.5
GTEX-14BMV-3026-SM-5S2PQ 50-59 years, male 21.5
GTEX-11GSO-2926-SM-5HL73 60-69 years, male 21.4
GTEX-12WSC-3026-SM-5GCNF 50-59 years, male 21.2
GTEX-13FLW-1426-SM-5K7YE 50-59 years, male 21.0
GTEX-Z93S-2926-SM-57WB9 50-59 years, male 21.0
GTEX-11NUK-2926-SM-5A5MD 50-59 years, male 20.8
GTEX-11NV4-2126-SM-5N9DS 60-69 years, male 20.7
GTEX-11DXY-3226-SM-5GIDE 60-69 years, male 20.6
GTEX-RU72-3026-SM-5SI7Y 50-59 years, female 20.6
GTEX-11TTK-2926-SM-5PNYP 60-69 years, female 20.5
GTEX-ZYFD-3026-SM-5E44C 50-59 years, male 20.5
GTEX-Y8DK-0826-SM-4TT3T 60-69 years, male 20.4
GTEX-ZAJG-3126-SM-5HL9J 50-59 years, female 20.2
GTEX-ZZPT-3026-SM-5GZXH 50-59 years, male 20.2
GTEX-13FHP-3026-SM-5IJBS 50-59 years, male 20.1
GTEX-11GSP-3226-SM-5986O 60-69 years, female 19.9
GTEX-13O3O-3126-SM-5KM3H 60-69 years, female 19.6
GTEX-N7MT-1126-SM-5SI7V 60-69 years, female 19.6
GTEX-11WQK-3026-SM-5EQL6 50-59 years, male 19.5
GTEX-12WSD-3126-SM-5HL7P 60-69 years, female 19.3
GTEX-14ASI-3026-SM-5S2PN 60-69 years, male 19.3
GTEX-Y111-2726-SM-4TT3N 50-59 years, male 19.1
GTEX-145MH-3026-SM-5Q5DZ 50-59 years, male 18.8
GTEX-WZTO-2926-SM-3NM9I 40-49 years, male 18.8
GTEX-13OW7-3026-SM-5L3GY 50-59 years, male 18.7
GTEX-WL46-2926-SM-3LK82 50-59 years, male 18.4
GTEX-WVLH-3026-SM-3MJG9 50-59 years, male 18.4
GTEX-13FHO-3026-SM-5J1O9 60-69 years, male 18.3
GTEX-12ZZW-2926-SM-5LZUP 50-59 years, male 18.2
GTEX-NPJ8-1526-SM-2D7VU 40-49 years, male 18.2
GTEX-12ZZZ-3026-SM-5BC67 60-69 years, male 18.0
GTEX-12126-1026-SM-5P9JJ 20-29 years, male 17.9
GTEX-ZE7O-3126-SM-5HL5X 50-59 years, female 17.9
GTEX-13FXS-3126-SM-5J2NN 50-59 years, male 17.8
GTEX-13X6K-2926-SM-5Q5D5 60-69 years, female 17.8
GTEX-11GS4-3126-SM-5A5LH 60-69 years, male 17.7
GTEX-13IVO-2926-SM-5L3CZ 70-79 years, male 17.7
GTEX-X4XX-3026-SM-3NMB2 60-69 years, male 17.7
GTEX-11EI6-3026-SM-5GZZO 60-69 years, male 17.6
GTEX-T5JC-2426-SM-3NMDB 20-29 years, male 17.5
GTEX-132Q8-3026-SM-5PNVG 60-69 years, male 17.4
GTEX-13X6J-3026-SM-5Q5CU 50-59 years, male 17.4
GTEX-145MG-3026-SM-5RQJA 50-59 years, male 17.4
GTEX-13PL6-3126-SM-5LUAR 40-49 years, female 17.3
GTEX-1128S-2726-SM-5H12C 60-69 years, female 17.2
GTEX-139T8-1026-SM-5J2MC 60-69 years, male 17.2
GTEX-13VXU-2926-SM-5LU5C 50-59 years, male 17.2
GTEX-145MF-2726-SM-5O995 50-59 years, male 17.2
GTEX-13QIC-2926-SM-5J2NF 60-69 years, female 17.0
GTEX-11ONC-2926-SM-5P9JM 60-69 years, male 16.9
GTEX-12ZZY-3026-SM-5GCOU 60-69 years, male 16.9
GTEX-12WSA-2926-SM-5EQ4D 60-69 years, male 16.8
GTEX-13JVG-3126-SM-5L3FH 60-69 years, male 16.7
GTEX-1445S-3026-SM-5O9BR 60-69 years, male 16.6
GTEX-ZVT3-3026-SM-5E43N 60-69 years, female 16.5
GTEX-Q2AG-2926-SM-2HMJ3 40-49 years, female 16.3
GTEX-YJ89-3026-SM-5IFJI 60-69 years, male 16.0
GTEX-1117F-3226-SM-5N9CT 60-69 years, female 15.8
GTEX-ZAK1-3026-SM-5S2MJ 50-59 years, female 15.8
GTEX-147GR-3026-SM-5S2ML 60-69 years, male 15.7
GTEX-14A5I-2926-SM-5Q5CQ 50-59 years, female 15.3
GTEX-131YS-3126-SM-5KLYT 60-69 years, female 14.9
GTEX-12WSH-3026-SM-5CVNI 50-59 years, male 14.3
GTEX-ZUA1-3026-SM-59HJC 40-49 years, male 14.3
GTEX-13G51-3026-SM-5IJB8 60-69 years, male 14.2
GTEX-11DXW-1126-SM-5H12Q 40-49 years, male 13.7
GTEX-XLM4-3026-SM-4AT6L 60-69 years, male 13.4
GTEX-QVUS-2826-SM-3GADB 60-69 years, female 13.2
GTEX-13PVQ-3026-SM-5SI93 50-59 years, male 13.1
GTEX-T2IS-3026-SM-32QPM 20-29 years, female 12.9
GTEX-13OW8-2826-SM-5L3GC 60-69 years, male 12.5
GTEX-131XW-3126-SM-5LZUC 50-59 years, female 12.4
GTEX-OXRN-2426-SM-2I5EQ 50-59 years, male 12.1
GTEX-T6MN-2626-SM-32PMQ 50-59 years, male 12.0
GTEX-13S7M-3126-SM-5RQJQ 60-69 years, female 11.9
GTEX-144GL-3026-SM-5Q5CW 50-59 years, male 11.9
GTEX-RNOR-2326-SM-2TF4I 50-59 years, female 11.4
GTEX-QVJO-1426-SM-2S1QY 60-69 years, female 11.2
GTEX-PWO3-0926-SM-2I5EY 60-69 years, female 11.1
GTEX-111FC-3126-SM-5GZZ2 60-69 years, male 10.9
GTEX-NPJ7-2726-SM-2I3FT 60-69 years, female 9.4
GTEX-PVOW-2526-SM-2XCF7 40-49 years, male 9.2
GTEX-UTHO-3026-SM-3GAFB 60-69 years, male 8.7
GTEX-QDT8-2926-SM-32PKC 30-39 years, female 8.5
GTEX-11O72-2926-SM-5BC4V 40-49 years, male 8.2
GTEX-QMR6-1426-SM-32PLA 50-59 years, male 7.8
GTEX-11OF3-2926-SM-5HL78 60-69 years, male 7.6
GTEX-TSE9-3026-SM-3DB76 60-69 years, female 6.7
Show all
Brain - Frontal Cortex (BA9)
RPKM: 23.5
Samples: 108

Max RPKM: 49.4
Min RPKM: 8.1
Std RPKM: 7.5
Median RPKM: 23.3
GTEX-12ZZX-0011-R10b-SM-5DUWK 40-49 years, female 49.4
GTEX-1313W-0011-R10b-SM-5DUXA 50-59 years, female 41.5
GTEX-X4EP-0011-R10B-SM-4QASJ 60-69 years, female 40.3
GTEX-13NYB-0011-R10a-SM-5KM43 40-49 years, male 39.6
GTEX-ZF28-0011-R10a-SM-4WWEH 60-69 years, male 38.9
GTEX-13NYS-0011-R10a-SM-5MR4S 60-69 years, male 38.4
GTEX-12WSM-0011-R10a-SM-5DUWV 60-69 years, male 38.2
GTEX-131XH-0011-R10a-SM-5EGLJ 50-59 years, male 35.0
GTEX-131YS-0011-R10b-SM-5EQ5N 60-69 years, female 34.0
GTEX-13O3Q-0011-R10b-SM-5KM39 50-59 years, male 32.9
GTEX-X585-0011-R10A-SM-46MUY 50-59 years, male 32.3
GTEX-ZXG5-0011-R10a-SM-57WDD 60-69 years, male 32.0
GTEX-13N2G-0011-R10a-SM-5MR34 60-69 years, male 31.9
GTEX-13G51-0011-R10b-SM-5LZYF 60-69 years, male 31.1
GTEX-13JVG-0011-R10b-SM-5KM2P 60-69 years, male 30.8
GTEX-14BIN-0011-R10a-SM-5S2UA 50-59 years, female 29.8
GTEX-147GR-0011-R10b-SM-5S2UM 60-69 years, male 29.7
GTEX-13X6J-0011-R10b-SM-5PNWA 50-59 years, male 29.1
GTEX-12ZZY-0011-R10b-SM-5HL7W 60-69 years, male 28.9
GTEX-145MG-0011-R10a-SM-5PNWG 50-59 years, male 28.8
GTEX-13OVJ-0011-R10b-SM-5L3HT 50-59 years, female 28.7
GTEX-13OVL-0011-R10a-SM-5L3GS 50-59 years, male 28.6
GTEX-13FHO-0011-R10b-SM-5J2MM 60-69 years, male 28.1
GTEX-Z93S-0011-R10a-SM-4RGNM 50-59 years, male 28.1
GTEX-ZVZQ-0011-R10b-SM-51MRT 60-69 years, female 28.1
GTEX-12126-0011-R10b-SM-5BC6T 20-29 years, male 28.0
GTEX-13X6I-0011-R10a-SM-5PNWI 60-69 years, male 27.9
GTEX-145MH-0011-R10b-SM-5PNUK 50-59 years, male 27.8
GTEX-ZUA1-0011-R10a-SM-51MT6 40-49 years, male 27.8
GTEX-13JUV-0011-R10b-SM-5LZXR 40-49 years, female 27.4
GTEX-NL3H-0011-R10A-SM-2I3E9 60-69 years, male 27.4
GTEX-12WSC-0011-R10a-SM-5GU57 50-59 years, male 27.3
GTEX-NL4W-0011-R10A-SM-2I3DY 50-59 years, male 26.7
GTEX-11WQC-0011-R10a-SM-57WCT 60-69 years, male 26.6
GTEX-132Q8-0011-R10b-SM-5DUWZ 60-69 years, male 26.6
GTEX-13OW6-0011-R10a-SM-5L3HE 50-59 years, male 26.1
GTEX-13SLX-0011-R10a-SM-5P9HV 50-59 years, female 25.8
GTEX-X4XX-0011-R10B-SM-46MWO 60-69 years, male 25.7
GTEX-139TS-0011-R10a-SM-5K7TU 60-69 years, male 25.5
GTEX-12ZZZ-0011-R10a-SM-5P9HC 60-69 years, male 25.3
GTEX-13OW8-0011-R10a-SM-5L3H6 60-69 years, male 25.3
GTEX-12WSF-0011-R10a-SM-5LZVH 70-79 years, male 25.2
GTEX-WZTO-0011-R10B-SM-4E3KB 40-49 years, male 25.0
GTEX-T5JC-0011-R10A-SM-32PM2 20-29 years, male 24.7
GTEX-N7MS-0011-R10A-SM-2HMJK 60-69 years, male 24.5
GTEX-13N1W-0011-R10b-SM-5MR4H 70-79 years, male 24.4
GTEX-XLM4-0011-R10A-SM-4AT5P 60-69 years, male 24.4
GTEX-145LS-0011-R10a-SM-5PNUQ 60-69 years, female 24.3
GTEX-ZE7O-0011-R10a-SM-57WAZ 50-59 years, female 24.1
GTEX-12WSE-0011-R10b-SM-5P9JV 20-29 years, male 24.0
GTEX-XMD1-0011-R10A-SM-4AT4A 60-69 years, male 23.7
GTEX-11WQK-0011-R10a-SM-5BC6R 50-59 years, male 23.6
GTEX-12WSH-0011-R10a-SM-5LZUS 50-59 years, male 23.5
GTEX-13FXS-0011-R10a-SM-5J2MA 50-59 years, male 23.3
GTEX-13OW7-0011-R10a-SM-5L3H3 50-59 years, male 23.3
GTEX-WL46-0011-R10A-SM-3MJFQ 50-59 years, male 23.3
GTEX-YFC4-0011-R10a-SM-4SOK5 40-49 years, female 23.3
GTEX-13SLW-0011-R10a-SM-5S2UI 70-79 years, male 23.2
GTEX-12WSD-0011-R10b-SM-5GU79 60-69 years, female 22.4
GTEX-13FLV-0011-R10b-SM-5LZZ2 50-59 years, male 22.4
GTEX-X261-0011-R10B-SM-4E3JT 50-59 years, male 22.3
GTEX-ZDXO-0011-R10a-SM-4WWD8 60-69 years, male 22.0
GTEX-11GSP-0011-R10a-SM-5NQ7J 60-69 years, female 21.9
GTEX-13X6K-0011-R10a-SM-5P9JR 60-69 years, female 21.8
GTEX-WWYW-0011-R10A-SM-3NB35 50-59 years, female 21.8
GTEX-NPJ8-0011-R10A-SM-2YUMO 40-49 years, male 21.6
GTEX-13FLW-0011-R10b-SM-5LZZF 50-59 years, male 21.5
GTEX-14ASI-0011-R10b-SM-5S2VZ 60-69 years, male 21.5
GTEX-13QIC-0011-R10a-SM-5O9C7 60-69 years, female 21.2
GTEX-WVLH-0011-R10A-SM-3MJFM 50-59 years, male 21.0
GTEX-11ZUS-0011-R10b-SM-5BC79 30-39 years, male 20.8
GTEX-1445S-0011-R10a-SM-5PNWB 60-69 years, male 20.8
GTEX-13RTJ-0011-R10b-SM-5O9CW 60-69 years, male 20.5
GTEX-Q2AG-0011-R10A-SM-2HMLA 40-49 years, female 20.5
GTEX-13O3O-0011-R10a-SM-5LUA9 60-69 years, female 20.4
GTEX-13QJC-0011-R10a-SM-5SI63 60-69 years, female 20.2
GTEX-Y8DK-0011-R10A-SM-4SOK1 60-69 years, male 20.2
GTEX-13FTZ-0011-R10b-SM-5KLZS 60-69 years, male 19.4
GTEX-13IVO-0011-R10a-SM-5LZY3 70-79 years, male 19.3
GTEX-S7SE-0011-R10A-SM-2XCDF 50-59 years, male 19.3
GTEX-1477Z-0011-R10b-SM-5S2RF 60-69 years, male 19.1
GTEX-YJ89-0011-R10a-SM-4SOK9 60-69 years, male 19.0
GTEX-13CZV-0011-R10b-SM-5LZYD 60-69 years, male 18.8
GTEX-14BIL-0011-R10a-SM-5SI75 50-59 years, male 18.8
GTEX-11H98-0011-R10b-SM-5NQ98 50-59 years, male 18.0
GTEX-13S7M-0011-R10b-SM-5PNZB 60-69 years, female 17.9
GTEX-145LU-0011-R10a-SM-5PNWJ 50-59 years, male 17.5
GTEX-ZAB4-0011-R10a-SM-4SOKH 40-49 years, male 16.9
GTEX-N7MT-0011-R10A-SM-2I3E1 60-69 years, female 16.8
GTEX-T6MN-0011-R10A-SM-32QP7 50-59 years, male 16.4
GTEX-13NZA-0011-R10b-SM-5KM54 60-69 years, male 16.3
GTEX-ZVT3-0011-R10b-SM-57WB6 60-69 years, female 16.2
GTEX-ZV68-0011-R10a-SM-51MT7 50-59 years, female 15.8
GTEX-QVJO-0011-R10A-SM-2S1QJ 60-69 years, female 15.7
GTEX-12ZZW-0011-R10b-SM-5HL9X 50-59 years, male 15.4
GTEX-12WSA-0011-R10b-SM-5P9ET 60-69 years, male 15.2
GTEX-147F4-0011-R10b-SM-5S2WC 50-59 years, male 14.8
GTEX-OXRN-0011-R10A-SM-2I5GC 50-59 years, male 14.3
GTEX-TSE9-0011-R10A-SM-3DB7O 60-69 years, female 13.7
GTEX-14753-0011-R10b-SM-5S2WE 60-69 years, male 11.3
GTEX-NPJ7-0011-R10A-SM-2I3E5 60-69 years, female 10.9
GTEX-QMR6-0011-R10A-SM-32PKO 50-59 years, male 10.8
GTEX-QVUS-0011-R10A-SM-3GIK3 60-69 years, female 9.2
GTEX-RVPU-0011-R10A-SM-2XCAH 50-59 years, male 9.2
GTEX-131XW-0011-R10a-SM-5DUVA 50-59 years, female 8.7
GTEX-OXRO-0011-R10A-SM-2I5EH 60-69 years, female 8.4
GTEX-QDT8-0011-R10A-SM-32PKG 30-39 years, female 8.2
GTEX-P44H-0011-R10A-SM-2XCEK 40-49 years, male 8.1
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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