Cell atlas - PKD1L3 - The Human Protein Atlas

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PKD1L3

TISSUE

CELL

PATHOLOGY

CELL ATLAS RNA EXPRESSION

GENE/PROTEIN

Dictionary

Human cell

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GENERAL INFORMATION
Gene name	PKD1L3
Gene description	Polycystic kidney disease 1-like 3
Protein class	Predicted membrane proteins Transporters
Predicted localization	Membrane
Number of transcripts	1
	SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION
Summary
RNA cell category	Not detected
Protein evidence	Evidence at protein level
Main location	Not available

DATA RELIABILITY
Reliability score	Pending cell analysis.

ASSAYS

RNA EXPRESSION OVERVIEW
RNA cell line category: Not detected Organ Origin Category Expression Alphabetical Cell lines sorted after organ of phenotypic resemblance. Cell lines sorted after biological source for establishment. Cell lines sorted after the cell line category according to Cellosaurus. Cell lines sorted on descending RNA expression. Cell lines sorted alphabetically.

GENE INFORMATION
Gene name	PKD1L3
Synonyms
Description	Polycystic kidney disease 1-like 3 (HGNC Symbol)
Entrez gene summary	This gene encodes a member of the polycystin protein family. The encoded protein contains 11 transmembrane domains, a latrophilin/CL-1-like GPCR proteolytic site (GPS) domain, and a polycystin-1, lipoxygenase, alpha-toxin (PLAT) domain. This protein may function as a component of cation channel pores.[provided by RefSeq, Apr 2009]
Chromosome	16
Cytoband	q22.2
Chromosome location (bp)	71929538 - 71999978
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000277481 (version 83.38)
Entrez gene	342372
UniProt	Q7Z443 (UniProt - Evidence at protein level)
neXtProt	NX_Q7Z443
Antibodypedia	PKD1L3 antibodies

PROTEIN BROWSER

PKD1L3-001

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
PKD1L3-001 ENSP00000480090 ENST00000620267	Q7Z443 [Direct mapping] Polycystic kidney disease protein 1-like 3 Show all	Transporters Transporter channels and pores Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based >9TM proteins predicted by MDM Protein evidence (Kim et al 2014) Show all	GO:0001581 [detection of chemical stimulus involved in sensory perception of sour taste] GO:0001822 [kidney development] GO:0005261 [cation channel activity] GO:0005262 [calcium channel activity] GO:0005515 [protein binding] GO:0005886 [plasma membrane] GO:0006812 [cation transport] GO:0008324 [cation transmembrane transporter activity] GO:0009986 [cell surface] GO:0016020 [membrane] GO:0030246 [carbohydrate binding] GO:0033040 [sour taste receptor activity] GO:0034703 [cation channel complex] GO:0043235 [receptor complex] GO:0050915 [sensory perception of sour taste] GO:0070062 [extracellular exosome] GO:0070588 [calcium ion transmembrane transport] GO:0071468 [cellular response to acidic pH] GO:0098655 [cation transmembrane transport] Show all	1732 aa 195.9 kDa	No	>9

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.