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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:1744.8TPM
GTEx:316.0RPKM
FANTOM5:1210.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Chondrocytes:Not available
Fibroblasts:Not available
Peripheral nerve:Not available
 
 
 
 

Antibody staining

Antibody HPA003315

  

Antibody HPA064736

  

Antibody CAB017118

  

Antibody CAB068930

  

Adipocytes

 Medium   Medium   Medium  

Chondrocytes

 Low   Low  

Fibroblasts

 Low   Medium   Medium  

Peripheral nerve

 Medium   Not detected  
          
          
          
       
       
       

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Not detected
Fibroblasts:Low
Peripheral nerve:Not available
 
 

Antibody staining

Antibody HPA003315

  

Antibody HPA064736

  

Antibody CAB017118

  

Antibody CAB068930

  

Adipocytes

 Low   Medium   High   Medium  

Chondrocytes

 Not detected  

Fibroblasts

 Low   High   Medium   Medium  

Peripheral nerve

 Not detected   Medium  
          
       
       
       

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

1744.8
N/A Female, age 80 Sample 1
TPM: 954.6
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 1759
N/A Female, age 57 Sample 3
TPM: 1329
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 1415
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 3266.3
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

316.0

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 337.4
Samples: 350

Max RPKM: 1161.6
Min RPKM: 26.5
Std RPKM: 188.6
Median RPKM: 291.7
GTEX-XBEC-0326-SM-4AT4M 50-59 years, male 1161.6
GTEX-145MI-0426-SM-5O99V 60-69 years, female 1114.8
GTEX-13OVI-1326-SM-5IJBO 60-69 years, female 1027.1
GTEX-XQ3S-1626-SM-4WAYN 20-29 years, male 946.8
GTEX-Y5V5-2426-SM-5IFJA 60-69 years, female 868.7
GTEX-ZDTS-0226-SM-5HL7Q 60-69 years, male 850.3
GTEX-14BMV-0226-SM-5S2N2 50-59 years, male 847.2
GTEX-R55F-1426-SM-2TF53 50-59 years, male 836.1
GTEX-YFCO-2026-SM-4W21Q 40-49 years, male 818.6
GTEX-X4LF-1726-SM-3NMBZ 50-59 years, male 816.2
Show all
Adipose - Visceral (Omentum)
RPKM: 283.1
Samples: 227

Max RPKM: 827.4
Min RPKM: 41.9
Std RPKM: 143.0
Median RPKM: 259.6
GTEX-11DYG-2026-SM-5EGGX 60-69 years, male 827.4
GTEX-12WSI-1526-SM-5GCNM 50-59 years, male 783.4
GTEX-ZUA1-2126-SM-57YRB 40-49 years, male 755.5
GTEX-XUZC-1126-SM-4BOPZ 30-39 years, female 685.8
GTEX-113JC-0726-SM-5GZZR 50-59 years, female 672.3
GTEX-11PRG-1526-SM-5HL6Z 50-59 years, male 671.8
GTEX-1212Z-0526-SM-5FQSQ 60-69 years, male 653.3
GTEX-11ZTS-1326-SM-5EQMA 60-69 years, female 632.4
GTEX-YECK-1426-SM-5IFHE 60-69 years, male 591.8
GTEX-13N2G-1926-SM-5J1O3 60-69 years, male 558.4
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

1210.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 1210.8
FF:10010-101C1 65,65,76 years, mixed 1210.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.