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TACC3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:11.4TPM
GTEx:4.3RPKM
FANTOM5:5.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:High
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA005781

  

Antibody HPA022039

  

Antibody CAB010111

  

Endothelial cells

 Not detected   Not detected   Not detected  

Glandular cells

 High   Medium   High  

Peripheral nerve/ganglion

 Not detected   Not detected  
     
     
     

COLON - HPA RNA-seq

Average TPM

11.4
overview Male, age 54 Sample 1
TPM: 11.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 7.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 20.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 7.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 7.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 8.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 17.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 9.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 13
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 17
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 11.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 8.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 8.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

4.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 2.2
Samples: 149

Max RPKM: 5.6
Min RPKM: 0.5
Std RPKM: 0.8
Median RPKM: 2.0
GTEX-V955-1726-SM-4JBHF 60-69 years, male 5.6
GTEX-ZV6S-1126-SM-57WE9 40-49 years, female 5.6
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 5.2
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 4.8
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 4.6
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 4.4
GTEX-XBED-1726-SM-47JYO 60-69 years, male 4.1
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 3.6
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 3.6
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 3.4
Show all
Colon - Transverse
RPKM: 5.9
Samples: 196

Max RPKM: 20.8
Min RPKM: 0.7
Std RPKM: 4.0
Median RPKM: 4.6
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 20.8
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 20.6
GTEX-144GN-1126-SM-5LU33 50-59 years, male 20.2
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 20.2
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 17.0
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 16.0
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 16.0
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 15.2
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 14.7
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 13.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

5.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 5.4
FF:10014-101C5 62,83,84 years, mixed 5.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.