Tissue expression of AGPS - Staining in adipose tissue - The Human Protein Atlas

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AGPS

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TISSUE

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CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA ADIPOSE TISSUE

GENE/PROTEIN

Antibody validation

Dictionary
	Soft tissue


Tissue proteome
	Adipose

SOFT TISSUE - Expression summary

Protein expression

h

m

l

n

RNA expression

HPA:	13.4	TPM
GTEx:	6.0	RPKM
FANTOM5:	89.0	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Chondrocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA030209		Antibody HPA030210		Antibody HPA030211
Adipocytes	Not detected		Not detected		Not detected
Chondrocytes	Not detected		Not detected		Not detected
Fibroblasts	Not detected		Not detected		Not detected
Peripheral nerve	Not detected		Not detected		Not detected

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA030209		Antibody HPA030210		Antibody HPA030211
Adipocytes	Not detected		Not detected		Not detected
Fibroblasts	Not detected		Not detected		Not detected
Peripheral nerve	Not detected		Not detected		Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	13.4

N/A

Female, age 80

Sample 1
TPM: 19.6

Cell types%

Adipocytes: 95
Other cell types: 5

N/A

Female, age 45

Sample 2
TPM: 10.4

N/A

Female, age 57

Sample 3
TPM: 9.1

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

overview

Female, age 74

Sample 4
TPM: 15.6

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

overview

Female, age 59

Sample 5
TPM: 12.5

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	6.0

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 6.3

Samples: 350

Max RPKM: 11.4
Min RPKM: 2.7
Std RPKM: 1.2
Median RPKM: 6.2

GTEX-O5YT-0226-SM-32PK5

20-29 years, male

11.4

GTEX-QDT8-0226-SM-32PL4

30-39 years, female

11.4

GTEX-SSA3-0226-SM-32QPN

60-69 years, male

10.3

GTEX-11PRG-0626-SM-5BC56

50-59 years, male

9.6

GTEX-12ZZX-0226-SM-5DUXU

40-49 years, female

9.5

GTEX-SNMC-1326-SM-2XCFK

20-29 years, male

9.4

GTEX-ZEX8-2326-SM-5S2MN

50-59 years, male

9.4

GTEX-POYW-0726-SM-2XCEO

60-69 years, male

9.3

GTEX-Q734-1826-SM-2I3EL

40-49 years, female

9.2

GTEX-QEL4-0326-SM-3GAE5

50-59 years, male

9.1

Show all

Adipose - Visceral (Omentum)
RPKM: 5.5

Samples: 227

Max RPKM: 9.1
Min RPKM: 3.0
Std RPKM: 1.1
Median RPKM: 5.4

GTEX-117YW-0826-SM-5H11O

50-59 years, male

9.1

GTEX-13S86-0926-SM-5SI6I

40-49 years, male

9.0

GTEX-ZPU1-1226-SM-5HL71

40-49 years, male

8.9

GTEX-1128S-0926-SM-5GZZU

60-69 years, female

8.8

GTEX-11PRG-1526-SM-5HL6Z

50-59 years, male

8.8

GTEX-UPK5-1826-SM-3GAEB

40-49 years, male

8.2

GTEX-12WSG-0426-SM-5FQSE

50-59 years, female

8.1

GTEX-11NV4-1426-SM-5BC4W

60-69 years, male

7.9

GTEX-12WSC-1726-SM-5GCN3

50-59 years, male

7.8

GTEX-WFJO-1026-SM-3GIKL

30-39 years, male

7.7

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	89.0

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 89.0

65,65,76 years, mixed

89.0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.