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NGFR

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:3.4TPM
GTEx:7.8RPKM
FANTOM5:22.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA004765

  

Antibody CAB000143

  

Antibody CAB001995

  

Endothelial cells

 Not detected   Not detected   Not detected  

Glandular cells

 Low   Not detected   Not detected  

Peripheral nerve/ganglion

 Medium   High  
     
     
     

COLON - HPA RNA-seq

Average TPM

3.4
overview Male, age 54 Sample 1
TPM: 2.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 2.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 4.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 4.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 3.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 3.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 1.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 5.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 2.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 6.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 4.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

7.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 10.3
Samples: 149

Max RPKM: 28.4
Min RPKM: 4.0
Std RPKM: 4.5
Median RPKM: 9.2
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 28.4
GTEX-145LS-2926-SM-5O99G 60-69 years, female 24.2
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 22.3
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 22.2
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 20.9
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 20.5
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 19.9
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 19.4
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 19.0
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 18.2
Show all
Colon - Transverse
RPKM: 5.8
Samples: 196

Max RPKM: 35.8
Min RPKM: 0.7
Std RPKM: 4.5
Median RPKM: 4.7
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 35.8
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 24.8
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 19.3
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 17.4
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 16.6
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 16.5
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 15.0
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 14.2
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 14.2
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 14.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

22.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 22.9
FF:10014-101C5 62,83,84 years, mixed 22.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.