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KDM4A

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:17.3TPM
GTEx:8.7RPKM
FANTOM5:33.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA007610

  

Endothelial cells

 Not detected  

Glandular cells

 Low  

Peripheral nerve/ganglion

 Not detected  
 

COLON - HPA RNA-seq

Average TPM

17.3
overview Male, age 54 Sample 1
TPM: 19.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 15.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 15.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 20.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 9.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 14.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 21.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 17.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 16.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 21
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 22.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 19.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 12.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

8.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 6.3
Samples: 149

Max RPKM: 9.8
Min RPKM: 2.2
Std RPKM: 1.3
Median RPKM: 6.3
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 9.8
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 9.7
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 9.7
GTEX-WYVS-1126-SM-4SOJX 40-49 years, female 9.5
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 9.0
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 9.0
GTEX-WHWD-1526-SM-4OORV 50-59 years, male 8.7
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 8.6
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 8.4
GTEX-1399R-2126-SM-5K7WZ 30-39 years, male 8.4
Show all
Colon - Transverse
RPKM: 10.5
Samples: 196

Max RPKM: 21.2
Min RPKM: 1.1
Std RPKM: 3.7
Median RPKM: 10.5
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 21.2
GTEX-ZF2S-1926-SM-4WWAN 50-59 years, female 20.2
GTEX-11DXZ-1726-SM-5H12M 50-59 years, male 18.7
GTEX-WFG7-1526-SM-4LVMG 20-29 years, male 18.7
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 18.2
GTEX-U3ZN-2126-SM-4DXU1 30-39 years, female 18.1
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 17.5
GTEX-R55D-1826-SM-48FEF 50-59 years, male 17.5
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 17.4
GTEX-PLZ5-1126-SM-3P613 50-59 years, male 17.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

33.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 33.1
FF:10014-101C5 62,83,84 years, mixed 33.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.