Tissue expression of AFF4 - Staining in small intestine

SMALL INTESTINE - Expression summary

Protein expression

RNA expression

HPA:	17.1	TPM
GTEx:	10.7	RPKM
FANTOM5:	84.6	Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:

Low

Antibody staining	Antibody HPA023690
Glandular cells	Low

SMALL INTESTINE - HPA RNA-seq

Average TPM	17.1

Male, age 65

Sample 1
TPM: 13.1

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 39

Sample 2
TPM: 16.6

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 68

Sample 3
TPM: 18.9

Cell types%

Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55

Male, age 85

Sample 4
TPM: 19.5

SMALL INTESTINE - GTEx RNA-seq

Average RPKM	10.7

GTEx sample id

Sample description

RPKM

Small Intestine - Terminal Ileum
RPKM: 10.7

Samples: 88

Max RPKM: 22.9
Min RPKM: 5.8
Std RPKM: 2.8
Median RPKM: 10.3

GTEX-ZQUD-0926-SM-57WE3

30-39 years, male

22.9

GTEX-WEY5-1526-SM-4LMJF

40-49 years, female

18.9

GTEX-111CU-1326-SM-5NQ8L

50-59 years, male

17.2

GTEX-148VJ-2226-SM-5NQ9M

70-79 years, male

16.9

GTEX-12WSK-1526-SM-5CVNO

40-49 years, female

16.5

GTEX-117YX-0326-SM-5GICL

50-59 years, male

16.0

GTEX-11VI4-1626-SM-5EQKO

40-49 years, female

14.9

GTEX-1399U-2126-SM-5IFEZ

50-59 years, female

14.8

GTEX-ZLFU-1526-SM-4WWBT

40-49 years, male

14.0

GTEX-Y114-1426-SM-4TT6W

50-59 years, female

13.6

Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million	84.6

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 84.6

FF:10024-101D6

15,40,85 years, mixed

84.6