Tissue expression of CA12 - Staining in adipose tissue - The Human Protein Atlas

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CA12

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TISSUE

CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA ADIPOSE TISSUE

GENE/PROTEIN

Antibody validation

Dictionary
	Soft tissue


Tissue proteome
	Adipose

SOFT TISSUE - Expression summary

Protein expression

h

m

l

n

RNA expression

HPA:	6.2	TPM
GTEx:	4.3	RPKM
FANTOM5:	15.0	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:	Not detected
Fibroblasts:	Not detected
Adipocytes:	Not detected
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA008773		Antibody CAB025181		Antibody CAB062549		Antibody CAB068179
Chondrocytes	High		Not detected		Not detected
Fibroblasts	Not detected		Not detected		Not detected		Not detected
Adipocytes	Not detected		Not detected
Peripheral nerve	Not detected

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA008773		Antibody CAB025181		Antibody CAB062549		Antibody CAB068179
Adipocytes	Not detected		Not detected		Not detected		Not detected
Fibroblasts	Not detected		Not detected		Not detected		Not detected
Peripheral nerve	Not detected		Not detected		Not detected		Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	6.2

N/A

Female, age 80

Sample 1
TPM: 1.5

Cell types%

Adipocytes: 95
Other cell types: 5

N/A

Female, age 45

Sample 2
TPM: 3.3

N/A

Female, age 57

Sample 3
TPM: 2.3

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

overview

Female, age 74

Sample 4
TPM: 18.9

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

overview

Female, age 59

Sample 5
TPM: 4.8

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	4.3

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 4.4

Samples: 350

Max RPKM: 67.4
Min RPKM: 0.1
Std RPKM: 5.5
Median RPKM: 2.9

GTEX-POYW-0726-SM-2XCEO

60-69 years, male

67.4

GTEX-R55F-1426-SM-2TF53

50-59 years, male

40.6

GTEX-OXRN-0226-SM-2I5EJ

50-59 years, male

31.4

GTEX-145MI-0426-SM-5O99V

60-69 years, female

23.8

GTEX-132AR-0226-SM-5IJBE

50-59 years, female

23.5

GTEX-X88G-0226-SM-4GIE4

30-39 years, male

21.4

GTEX-Q734-1826-SM-2I3EL

40-49 years, female

19.9

GTEX-ZYVF-0226-SM-5GIEG

50-59 years, female

17.7

GTEX-X4XY-0326-SM-46MVZ

60-69 years, male

16.6

GTEX-13O1R-0226-SM-5K7U5

60-69 years, male

15.0

Show all

Adipose - Visceral (Omentum)
RPKM: 4.1

Samples: 227

Max RPKM: 131.8
Min RPKM: 0.1
Std RPKM: 10.5
Median RPKM: 1.4

GTEX-ZYW4-2226-SM-5GZYG

60-69 years, male

131.8

GTEX-13OVH-1126-SM-5K7YP

70-79 years, male

60.8

GTEX-13O3P-0926-SM-5IFFI

50-59 years, male

42.9

GTEX-13X6H-1726-SM-5Q5EH

50-59 years, female

28.9

GTEX-ZZPU-0326-SM-5N9BJ

50-59 years, female

23.9

GTEX-13X6I-1526-SM-5SIAC

60-69 years, male

21.5

GTEX-1128S-0926-SM-5GZZU

60-69 years, female

21.1

GTEX-ZTPG-2326-SM-57WFL

20-29 years, female

16.8

GTEX-ZAJG-1626-SM-5HL7I

50-59 years, female

15.7

GTEX-117YX-0726-SM-5GIET

50-59 years, male

14.8

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	15.0

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 15.0

65,65,76 years, mixed

15.0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.