Tissue expression of PTPRC - Staining in cerebral cortex - The Human Protein Atlas

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PTPRC

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TISSUE

CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation

Dictionary
	Cerebral cortex


Tissue proteome
	Brain
	Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h

m

l

n

RNA expression

HPA:	11.7	TPM
GTEx:	0.7	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Not detected
Glial cells:	Not detected
Neuronal cells:	Not detected
Neuropil:	Not detected

Antibody staining	Antibody HPA000440		Antibody CAB000052		Antibody CAB002800		Antibody CAB056154		Antibody CAB068221
Endothelial cells	Not detected		Not detected		Not detected		Not detected		Not detected
Glial cells	Not detected		Not detected		Not detected		Not detected		Not detected
Neuronal cells	Low		Not detected		Not detected		Not detected		Not detected
Neuropil	Not detected		Not detected		Not detected		Not detected		Not detected

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	11.7

N/A

Male, age 5

Sample 1
TPM: 10.9

overview

Female, age 40

Sample 2
TPM: 9

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

overview

Male, age 70

Sample 3
TPM: 15.1

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	0.7

GTEx sample id

Sample description

RPKM

Brain - Cortex
RPKM: 0.6

Samples: 114

Max RPKM: 5.4
Min RPKM: 0.1
Std RPKM: 0.6
Median RPKM: 0.4

GTEX-X585-3026-SM-46MWF

50-59 years, male

5.4

GTEX-132Q8-3026-SM-5PNVG

60-69 years, male

3.4

GTEX-N7MT-1126-SM-5SI7V

60-69 years, female

2.3

GTEX-13NYC-2826-SM-5K7WR

60-69 years, male

1.7

GTEX-11O72-2926-SM-5BC4V

40-49 years, male

1.4

GTEX-11TTK-2926-SM-5PNYP

60-69 years, female

1.4

GTEX-11WQK-3026-SM-5EQL6

50-59 years, male

1.4

GTEX-12WSA-2926-SM-5EQ4D

60-69 years, male

1.3

GTEX-13JVG-3126-SM-5L3FH

60-69 years, male

1.3

GTEX-13X6K-2926-SM-5Q5D5

60-69 years, female

1.2

Show all

Brain - Frontal Cortex (BA9)
RPKM: 0.8

Samples: 108

Max RPKM: 6.3
Min RPKM: 0.1
Std RPKM: 0.9
Median RPKM: 0.4

GTEX-X4EP-0011-R10B-SM-4QASJ

60-69 years, female

6.3

GTEX-XMD1-0011-R10A-SM-4AT4A

60-69 years, male

4.5

GTEX-X585-0011-R10A-SM-46MUY

50-59 years, male

4.4

GTEX-13N2G-0011-R10a-SM-5MR34

60-69 years, male

3.2

GTEX-NL4W-0011-R10A-SM-2I3DY

50-59 years, male

3.1

GTEX-QVJO-0011-R10A-SM-2S1QJ

60-69 years, female

2.6

GTEX-11ZUS-0011-R10b-SM-5BC79

30-39 years, male

2.5

GTEX-11WQK-0011-R10a-SM-5BC6R

50-59 years, male

2.4

GTEX-1445S-0011-R10a-SM-5PNWB

60-69 years, male

2.1

GTEX-13OVJ-0011-R10b-SM-5L3HT

50-59 years, female

2.0

Show all

CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.