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PTPRC

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:24.9TPM
GTEx:3.2RPKM
FANTOM5:54.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA000440

  

Antibody CAB000052

  

Antibody CAB002800

  

Antibody CAB056154

  

Antibody CAB068221

  

Endothelial cells

 Not detected   Not detected   Not detected   Not detected   Not detected  

Glandular cells

 Not detected   Not detected   Not detected   Not detected   Not detected  

Peripheral nerve/ganglion

 Not detected   Not detected   Not detected   Not detected   Not detected  
         
         
         

COLON - HPA RNA-seq

Average TPM

24.9
overview Male, age 54 Sample 1
TPM: 12.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 30
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 16.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 7.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 36.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 11.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 32
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 24
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 35.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 31.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 37
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 31.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 16.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

3.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 1.7
Samples: 149

Max RPKM: 10.0
Min RPKM: 0.3
Std RPKM: 1.4
Median RPKM: 1.3
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 10.0
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 10.0
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 7.2
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 6.1
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 5.3
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 5.0
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 4.6
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 4.0
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 3.9
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 3.7
Show all
Colon - Transverse
RPKM: 4.3
Samples: 196

Max RPKM: 36.4
Min RPKM: 0.5
Std RPKM: 3.8
Median RPKM: 3.4
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 36.4
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 19.6
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 17.0
GTEX-WHWD-1226-SM-4OOS1 50-59 years, male 15.9
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 14.6
GTEX-11NSD-1626-SM-5986U 20-29 years, male 12.7
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 11.8
GTEX-RM2N-0926-SM-48FD1 50-59 years, male 11.3
GTEX-144GM-1226-SM-5LU52 20-29 years, male 10.9
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 10.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

54.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 54.8
FF:10014-101C5 62,83,84 years, mixed 54.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.