Tissue expression of PTPRC - Staining in skin - The Human Protein Atlas

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PTPRC

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TISSUE

CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA SKIN

GENE/PROTEIN

Antibody validation

Dictionary
	Skin
	Anal skin


Tissue proteome
	Skin
	Extended skin samples

SKIN - Expression summary

Protein expression

h

m

l

n

RNA expression

HPA:	8.0	TPM
GTEx:	1.5	RPKM

SKIN 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:	Not detected
Keratinocytes:	Not detected
Langerhans:	Not detected
Melanocytes:	Not detected

Antibody staining	Antibody HPA000440		Antibody CAB000052		Antibody CAB002800		Antibody CAB056154		Antibody CAB068221
Fibroblasts	Not detected		Not detected		Not detected		Not detected		Not detected
Keratinocytes	Not detected		Not detected		Not detected		Not detected		Not detected
Langerhans	High		Not detected		Not detected		Not detected		Medium
Melanocytes	Not detected		Not detected		Low		Not detected		Not detected

SKIN 2 - Annotated protein expression

Annotated protein
expression

Epidermal cells:	Not detected

Antibody staining	Antibody HPA000440		Antibody CAB000052		Antibody CAB002800		Antibody CAB056154		Antibody CAB068221
Epidermal cells	Not detected		Not detected		Not detected		Not detected		Not detected

SKIN - HPA RNA-seq

Average TPM	8.0

overview

Female, age 34

Sample 1
TPM: 7.2

Cell types%

Keratinocytes: 60
Other cell types: 40

overview

Female, age 30

Sample 2
TPM: 9.3

Cell types%

Keratinocytes: 55
Other cell types: 45

N/A

Male, age 57

Sample 3
TPM: 7.4

SKIN - GTEx RNA-seq

Average RPKM	1.5

GTEx sample id

Sample description

RPKM

Skin - Not Sun Exposed (Suprapubic)
RPKM: 1.6

Samples: 250

Max RPKM: 5.3
Min RPKM: 0.2
Std RPKM: 0.9
Median RPKM: 1.3

GTEX-147JS-0226-SM-5S2U9

60-69 years, male

5.3

GTEX-14A5H-0826-SM-5QGPJ

60-69 years, male

5.2

GTEX-WYBS-0626-SM-3NMAS

60-69 years, female

4.7

GTEX-U8XE-0226-SM-4E3J3

30-39 years, male

4.6

GTEX-X8HC-0626-SM-4E3HQ

50-59 years, female

4.5

GTEX-11TUW-0626-SM-5LU9M

60-69 years, male

4.4

GTEX-ZVE2-2826-SM-5GU51

50-59 years, male

4.3

GTEX-Y5V5-0126-SM-5S2NW

60-69 years, female

4.1

GTEX-ZTSS-1426-SM-5985P

40-49 years, male

4.1

GTEX-13OW8-1026-SM-5J1NQ

60-69 years, male

4.0

Show all

Skin - Sun Exposed (Lower leg)
RPKM: 1.4

Samples: 357

Max RPKM: 10.8
Min RPKM: 0.1
Std RPKM: 1.0
Median RPKM: 1.1

GTEX-1192W-2626-SM-5Q5AF

60-69 years, male

10.8

GTEX-ZY6K-1826-SM-5GZXK

50-59 years, male

7.1

GTEX-13OVG-1926-SM-5L3DK

60-69 years, male

6.7

GTEX-13OVJ-0126-SM-5KM36

50-59 years, female

5.6

GTEX-144GN-2326-SM-5LU4F

50-59 years, male

4.2

GTEX-ZVE2-0226-SM-59HJB

50-59 years, male

4.1

GTEX-ZVT4-0126-SM-51MS1

50-59 years, female

4.1

GTEX-11TTK-0126-SM-5987B

60-69 years, female

3.9

GTEX-X62O-0126-SM-4E3JN

50-59 years, male

3.7

GTEX-VJYA-1126-SM-3GIJU

60-69 years, male

3.6

Show all

SKIN - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.