Tissue expression of PHF5A - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	23.3	TPM
GTEx:	17.0	RPKM
FANTOM5:	28.3	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

High

Antibody staining	Antibody HPA028885
Squamous epithelial cells	High

ESOPHAGUS - HPA RNA-seq

Average TPM	23.3

Female, age 70

Sample 1
TPM: 26

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 20.8

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 23

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	17.0

GTEx sample id

Sample description

RPKM

Esophagus - Mucosa
RPKM: 17.0

Samples: 286

Max RPKM: 37.0
Min RPKM: 8.7
Std RPKM: 3.9
Median RPKM: 16.5

GTEX-RUSQ-0826-SM-47JWW

50-59 years, male

37.0

GTEX-Y111-1626-SM-57WCY

50-59 years, male

32.0

GTEX-TMMY-1126-SM-4DXSX

40-49 years, female

29.3

GTEX-133LE-0626-SM-5IFFJ

20-29 years, female

27.4

GTEX-144GO-2726-SM-5O9A2

60-69 years, male

27.0

GTEX-XGQ4-1526-SM-4AT6H

50-59 years, male

26.8

GTEX-ZTX8-0226-SM-5E44D

20-29 years, male

26.8

GTEX-XLM4-2326-SM-4TT2D

60-69 years, male

26.0

GTEX-13PVQ-1726-SM-5IFF3

50-59 years, male

25.9

GTEX-11DZ1-2026-SM-5A5KG

50-59 years, male

25.6

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	28.3

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 28.3

FF:10015-101C6

68,74,75 years, mixed

28.3