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PHF5A
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TISSUE ATLAS PRIMARY DATA KIDNEY

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:23.4TPM
GTEx:14.9RPKM
FANTOM5:35.9Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:High
Cells in tubules:High
 

Antibody staining

Antibody HPA028885

 

Cells in glomeruli

High  

Cells in tubules

High  
 
 
 

KIDNEY - HPA RNA-seq

Average TPM

23.4

overview Female, age 58 Sample 1
TPM: 23.5
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67 Sample 2
TPM: 20
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55 Sample 3
TPM: 23.9
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46 Sample 4
TPM: 18.1
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57 Sample 5
TPM: 19.7
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78 Sample 6
TPM: 29.7
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73 Sample 7
TPM: 25.6
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59 Sample 8
TPM: 22.3
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48 Sample 9
TPM: 27.8
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

14.9

GTEx sample id

Sample description

RPKM

Kidney - Cortex
RPKM: 14.9
Samples: 32

Max RPKM: 20.6
Min RPKM: 7.5
Std RPKM: 3.1
Median RPKM: 15.3
GTEX-13NYB-1726-SM-5N9G2 40-49 years, male 20.6
GTEX-13O1R-2526-SM-5N9FW 60-69 years, male 19.3
GTEX-QLQW-1626-SM-4R1K1 30-39 years, male 18.9
GTEX-N7MS-1626-SM-3LK5F 60-69 years, male 18.5
GTEX-ZYT6-2226-SM-5GIC9 30-39 years, male 18.2
GTEX-147F4-2626-SM-5Q5CS 50-59 years, male 18.1
GTEX-1399S-0526-SM-5IJG8 30-39 years, female 18.0
GTEX-1497J-0826-SM-5NQAJ 60-69 years, male 17.6
GTEX-12696-0926-SM-5FQTV 60-69 years, male 17.3
GTEX-145MN-0326-SM-5QGQI 30-39 years, male 17.3
GTEX-13112-2126-SM-5GCO4 50-59 years, male 16.9
GTEX-ZLFU-0926-SM-5P9F8 40-49 years, male 16.3
GTEX-ZYFG-1626-SM-5GZYY 60-69 years, female 16.0
GTEX-RN64-1626-SM-48FD7 50-59 years, male 15.9
GTEX-13RTJ-2226-SM-5S2Q1 60-69 years, male 15.4
GTEX-ZVZP-0926-SM-5GIDB 50-59 years, male 15.4
GTEX-11TTK-1926-SM-5PNW8 60-69 years, female 15.1
GTEX-13OVL-1826-SM-5KLZR 50-59 years, male 14.7
GTEX-XPVG-0526-SM-4B65N 50-59 years, male 14.2
GTEX-NPJ8-2226-SM-3TW8D 40-49 years, male 13.6
GTEX-11GS4-2326-SM-5A5KS 60-69 years, male 13.5
GTEX-11OF3-1326-SM-5N9FJ 60-69 years, male 13.4
GTEX-UPIC-1126-SM-4IHLO 20-29 years, female 12.9
GTEX-12WSG-0826-SM-5EQ5A 50-59 years, female 12.7
GTEX-13OVI-1126-SM-5KLZF 60-69 years, female 12.6
GTEX-P4QS-1126-SM-3NMD5 60-69 years, male 12.5
GTEX-Y5V6-2026-SM-5IFHO 60-69 years, male 11.5
GTEX-T5JC-1526-SM-4DM68 20-29 years, male 11.2
GTEX-ZC5H-1726-SM-5HL7X 40-49 years, female 10.4
GTEX-QDVN-1626-SM-48TZC 50-59 years, male 10.2
GTEX-13OW6-1826-SM-5N9F9 50-59 years, male 10.1
GTEX-ZYFD-1526-SM-5NQ7T 50-59 years, male 7.5
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

35.9

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 35.9
FF:10017-101C8 60,62,63 years, female 35.9

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