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JADE3

SOFT TISSUE - Expression summary

RNA expression
HPA:3.2TPM
GTEx:2.2RPKM
FANTOM5:8.2Tags Per Million

SOFT TISSUE 1 - Annotated protein expression
 

Antibody staining

Antibody HPA006007

  

Adipocytes

 Not detected  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected  

Peripheral nerve

 Medium  
 
 
 

SOFT TISSUE 2 - Annotated protein expression
 

Antibody staining

Antibody HPA006007

  

Adipocytes

 Not detected  

Fibroblasts

 Not detected  
    
    
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

3.2
N/A Female, age 80 Sample 1
TPM: 3.5
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 3.2
N/A Female, age 57 Sample 3
TPM: 2.2
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 3.6
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 3.4
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

2.2

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 2.5
Samples: 350

Max RPKM: 5.5
Min RPKM: 1.0
Std RPKM: 0.6
Median RPKM: 2.5
GTEX-TSE9-0226-SM-3DB84 60-69 years, female 5.5
GTEX-POYW-0726-SM-2XCEO 60-69 years, male 4.6
GTEX-117YX-2226-SM-5EGJJ 50-59 years, male 4.4
GTEX-SNMC-1326-SM-2XCFK 20-29 years, male 4.1
GTEX-P44H-0326-SM-2XCES 40-49 years, male 4.0
GTEX-11WQC-2426-SM-5EQKQ 60-69 years, male 3.9
GTEX-13NZ9-0526-SM-5J1OX 50-59 years, male 3.9
GTEX-X5EB-2426-SM-4E3HX 40-49 years, male 3.9
GTEX-13OVI-1326-SM-5IJBO 60-69 years, female 3.7
GTEX-148VI-1726-SM-5S2W9 60-69 years, female 3.7
Show all
Adipose - Visceral (Omentum)
RPKM: 1.8
Samples: 227

Max RPKM: 3.4
Min RPKM: 0.4
Std RPKM: 0.4
Median RPKM: 1.7
GTEX-13S86-0926-SM-5SI6I 40-49 years, male 3.4
GTEX-13JUV-0626-SM-5J1MQ 40-49 years, female 3.3
GTEX-132Q8-1726-SM-5EGK8 60-69 years, male 3.2
GTEX-WFJO-1026-SM-3GIKL 30-39 years, male 3.2
GTEX-12WSA-1626-SM-5EGJV 60-69 years, male 3.1
GTEX-VUSG-1426-SM-3GIJN 50-59 years, male 2.9
GTEX-13PDP-1226-SM-5K7TW 60-69 years, male 2.8
GTEX-145MI-0826-SM-5SI95 60-69 years, female 2.8
GTEX-X585-2526-SM-4QAS1 50-59 years, male 2.7
GTEX-ZXG5-1626-SM-59HJK 60-69 years, male 2.7
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

8.2

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 8.2
FF:10010-101C1 65,65,76 years, mixed 8.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.