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ESOPHAGUS - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:27.6TPM
GTEx:13.2RPKM
FANTOM5:26.5Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Medium
 

Antibody staining

Antibody HPA001330

  

Squamous epithelial cells

 Medium  
 
 

ESOPHAGUS - HPA RNA-seq

Average TPM

27.6
overview Female, age 70 Sample 1
TPM: 31.2
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 25.8
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 25.7
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

13.2

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 13.2
Samples: 286

Max RPKM: 29.9
Min RPKM: 8.1
Std RPKM: 2.9
Median RPKM: 12.8
GTEX-ZZPT-1426-SM-5N9C5 50-59 years, male 29.9
GTEX-R55D-1126-SM-48FEB 50-59 years, male 25.2
GTEX-139UW-1126-SM-5IJEJ 60-69 years, male 21.8
GTEX-13PVQ-1726-SM-5IFF3 50-59 years, male 21.6
GTEX-XLM4-2326-SM-4TT2D 60-69 years, male 21.6
GTEX-12WSA-1426-SM-5EGJU 60-69 years, male 21.4
GTEX-11DZ1-2026-SM-5A5KG 50-59 years, male 21.3
GTEX-139TU-1226-SM-5J2NL 60-69 years, male 20.1
GTEX-X585-1226-SM-46MW7 50-59 years, male 20.0
GTEX-145LS-1826-SM-5LUAZ 60-69 years, female 19.8
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

26.5

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 26.5
FF:10015-101C6 68,74,75 years, mixed 26.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.