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SCG3

CEREBRAL CORTEX - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:279.1TPM
GTEx:78.3RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Low
Neuronal cells:High
Neuropil:Low
 

Antibody staining

Antibody HPA006880

  

Antibody HPA053715

  

Antibody CAB033274

  

Endothelial cells

 Not detected   Not detected   Not detected  

Glial cells

 Low   Not detected   Not detected  

Neuronal cells

 High   Not detected   Not detected  

Neuropil

 Low   Low   Not detected  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

279.1
N/A Male, age 5 Sample 1
TPM: 200.2
overview Female, age 40 Sample 2
TPM: 465.5
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70 Sample 3
TPM: 171.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

78.3

GTEx sample id

Sample description

RPKM
Brain - Cortex
RPKM: 72.5
Samples: 114

Max RPKM: 116.9
Min RPKM: 22.2
Std RPKM: 17.9
Median RPKM: 73.7
GTEX-TSE9-3026-SM-3DB76 60-69 years, female 116.9
GTEX-13OVJ-2826-SM-5L3GW 50-59 years, female 114.0
GTEX-11NUK-2926-SM-5A5MD 50-59 years, male 110.3
GTEX-RU72-3026-SM-5SI7Y 50-59 years, female 102.9
GTEX-QMR6-1426-SM-32PLA 50-59 years, male 100.7
GTEX-12ZZZ-3026-SM-5BC67 60-69 years, male 99.1
GTEX-QVJO-1426-SM-2S1QY 60-69 years, female 97.6
GTEX-12WSD-3126-SM-5HL7P 60-69 years, female 96.6
GTEX-131XW-3126-SM-5LZUC 50-59 years, female 96.4
GTEX-PWO3-0926-SM-2I5EY 60-69 years, female 95.6
Show all
Brain - Frontal Cortex (BA9)
RPKM: 84.3
Samples: 108

Max RPKM: 180.3
Min RPKM: 28.2
Std RPKM: 22.9
Median RPKM: 80.0
GTEX-13OVJ-0011-R10b-SM-5L3HT 50-59 years, female 180.3
GTEX-QVUS-0011-R10A-SM-3GIK3 60-69 years, female 140.0
GTEX-1445S-0011-R10a-SM-5PNWB 60-69 years, male 139.1
GTEX-12ZZY-0011-R10b-SM-5HL7W 60-69 years, male 129.7
GTEX-11H98-0011-R10b-SM-5NQ98 50-59 years, male 129.4
GTEX-12WSD-0011-R10b-SM-5GU79 60-69 years, female 124.9
GTEX-13OW8-0011-R10a-SM-5L3H6 60-69 years, male 123.3
GTEX-TSE9-0011-R10A-SM-3DB7O 60-69 years, female 119.4
GTEX-QMR6-0011-R10A-SM-32PKO 50-59 years, male 119.1
GTEX-139TS-0011-R10a-SM-5K7TU 60-69 years, male 118.9
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.