Tissue expression of EBI3 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	1.0	TPM
GTEx:	0.7	RPKM
FANTOM5:	2.2	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Not detected

Antibody staining	Antibody HPA046635
Squamous epithelial cells	Not detected

ESOPHAGUS - HPA RNA-seq

Average TPM	1.0

Female, age 70

Sample 1
TPM: 1.3

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 0.7

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 0.9

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	0.7

GTEx sample id

Sample description

RPKM

Esophagus - Mucosa
RPKM: 0.7

Samples: 286

Max RPKM: 14.3
Min RPKM: 0.0
Std RPKM: 1.0
Median RPKM: 0.4

GTEX-R55D-1126-SM-48FEB

50-59 years, male

14.3

GTEX-145ME-0526-SM-5QGQV

40-49 years, female

6.7

GTEX-ZGAY-1126-SM-4WWBS

40-49 years, female

3.2

GTEX-ZT9X-0526-SM-5GCOP

40-49 years, male

3.1

GTEX-P4QS-0626-SM-3NMD1

60-69 years, male

3.0

GTEX-13CF3-1626-SM-5IFG9

60-69 years, female

2.9

GTEX-OXRL-0626-SM-3NM9C

50-59 years, male

2.9

GTEX-RUSQ-0826-SM-47JWW

50-59 years, male

2.9

GTEX-WFJO-0826-SM-4LVM5

30-39 years, male

2.9

GTEX-146FR-0426-SM-5SI97

60-69 years, female

2.8

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	2.2

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 2.2

FF:10015-101C6

68,74,75 years, mixed

2.2