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TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:27.5TPM
GTEx:24.7RPKM
FANTOM5:106.1Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Medium
Hepatocytes:Medium
 

Antibody staining

Antibody HPA039227

 

Antibody HPA043625

 

Bile duct cells

Medium   Not detected  

Hepatocytes

Medium   High  
   
   
   

LIVER - HPA RNA-seq

Average TPM

27.5

N/A Female, age 60 Sample 1
TPM: 33
overview Male, age 54 Sample 2
TPM: 28.1
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74 Sample 3
TPM: 23.9
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62 Sample 4
TPM: 37
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78 Sample 5
TPM: 18.6
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53 Sample 6
TPM: 26.1
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77 Sample 7
TPM: 30.7
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72 Sample 8
TPM: 17.6
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70 Sample 9
TPM: 27.4
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23 Sample 10
TPM: 32.5
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

24.7

GTEx sample id

Sample description

RPKM

Liver
RPKM: 24.7
Samples: 119

Max RPKM: 54.2
Min RPKM: 8.2
Std RPKM: 8.7
Median RPKM: 23.4
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 54.2
GTEX-S32W-1926-SM-4AD63 50-59 years, female 50.4
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 50.0
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 45.1
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 44.6
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 39.4
GTEX-S33H-1626-SM-4AD68 30-39 years, male 38.8
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 38.5
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 38.3
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 38.0
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 37.3
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 36.6
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 36.1
GTEX-QEL4-1226-SM-447A4 50-59 years, male 36.1
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 33.5
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 33.3
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 33.1
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 33.0
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 33.0
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 32.8
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 32.6
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 32.5
GTEX-R53T-0326-SM-48FEC 50-59 years, female 32.2
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 31.6
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 30.8
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 30.7
GTEX-REY6-1226-SM-48FDR 60-69 years, male 30.7
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 30.1
GTEX-RU72-1426-SM-46MUF 50-59 years, female 30.0
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 29.9
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 29.5
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 29.5
GTEX-UPIC-0926-SM-4IHLV 20-29 years, female 29.2
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 29.0
GTEX-Q734-0326-SM-48U15 40-49 years, female 28.9
GTEX-X261-1726-SM-4PQYT 50-59 years, male 28.4
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 27.8
GTEX-WQUQ-1926-SM-4OOSA 60-69 years, male 27.7
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 27.5
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 27.5
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 27.4
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 27.4
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 27.1
GTEX-12696-0826-SM-5EGGE 60-69 years, male 27.1
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 27.0
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 26.9
GTEX-ZF29-2026-SM-4WWB7 60-69 years, female 26.8
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 26.7
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 26.7
GTEX-P78B-1326-SM-3P611 40-49 years, female 26.6
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 26.2
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 26.0
GTEX-13113-1326-SM-5GCOI 60-69 years, female 25.8
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 25.8
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 24.9
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 24.9
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 24.6
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 24.5
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 24.3
GTEX-QV44-0326-SM-4R1KD 50-59 years, male 23.4
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 23.3
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 23.1
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 22.8
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 22.6
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 22.1
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 22.1
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 21.5
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 21.4
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 21.2
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 21.2
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 21.0
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 21.0
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 20.7
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 20.4
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 20.2
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 20.0
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 20.0
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 19.9
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 19.8
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 19.5
GTEX-QEG4-1826-SM-4R1JN 30-39 years, male 19.4
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 19.2
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 18.9
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 18.7
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 18.4
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 18.3
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 18.3
GTEX-1399T-0826-SM-5IFES 60-69 years, male 18.2
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 18.2
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 18.2
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 18.2
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 17.8
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 17.7
GTEX-XOTO-0826-SM-4B65O 50-59 years, male 17.7
GTEX-11ZUS-2526-SM-59872 30-39 years, male 17.0
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 16.6
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 16.6
GTEX-YECK-1926-SM-4W21H 60-69 years, male 16.5
GTEX-11GSP-0626-SM-5986T 60-69 years, female 16.3
GTEX-13112-1426-SM-5EGH8 50-59 years, male 16.2
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 16.1
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 16.1
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 16.0
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 16.0
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 16.0
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 15.6
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 14.9
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 14.1
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 13.7
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 13.6
GTEX-RN64-1826-SM-48FDV 50-59 years, male 13.6
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 13.3
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 13.3
GTEX-QESD-2026-SM-447BI 20-29 years, male 13.2
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 13.1
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 12.5
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 11.7
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 11.6
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 8.2
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

106.1

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 106.1
FF:10018-101C9 64,69,70 years, mixed 106.1

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