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HMGCR

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:47.2TPM
GTEx:13.2RPKM
FANTOM5:28.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA008338

  

Antibody CAB016797

  

Endothelial cells

 Medium   Medium  

Glandular cells

 High   Medium  

Peripheral nerve/ganglion

 High   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

47.2
overview Male, age 54 Sample 1
TPM: 85.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 31.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 38.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 40.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 12.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 36.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 66.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 34.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 36.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 58.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 88
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 47.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 36.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

13.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 4.1
Samples: 149

Max RPKM: 18.6
Min RPKM: 1.9
Std RPKM: 1.6
Median RPKM: 3.9
GTEX-XBED-1726-SM-47JYO 60-69 years, male 18.6
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 9.4
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 8.4
GTEX-V955-1726-SM-4JBHF 60-69 years, male 7.9
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 7.1
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 6.4
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 6.3
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 5.9
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 5.9
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 5.8
Show all
Colon - Transverse
RPKM: 20.1
Samples: 196

Max RPKM: 82.4
Min RPKM: 2.1
Std RPKM: 16.0
Median RPKM: 16.9
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 82.4
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 69.8
GTEX-Q2AI-0926-SM-48U1F 40-49 years, male 65.5
GTEX-144GN-1126-SM-5LU33 50-59 years, male 60.7
GTEX-XBED-1526-SM-4AT5W 60-69 years, male 60.5
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 58.1
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 57.6
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 56.0
GTEX-144GM-1226-SM-5LU52 20-29 years, male 54.0
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 51.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

28.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 28.3
FF:10014-101C5 62,83,84 years, mixed 28.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.