Fields »
ABOUT
HELP
BLOG
KAT2B

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:10.5TPM
GTEx:8.9RPKM
FANTOM5:30.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody CAB004526

  

Endothelial cells

 Low  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Low  
 
 

COLON - HPA RNA-seq

Average TPM

10.5
overview Male, age 54 Sample 1
TPM: 13.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 6.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 13
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 7.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 8.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 9.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 9.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 14.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 8.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 13.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 12.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 11.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

8.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 10.4
Samples: 149

Max RPKM: 17.9
Min RPKM: 3.3
Std RPKM: 2.4
Median RPKM: 10.4
GTEX-145LS-2926-SM-5O99G 60-69 years, female 17.9
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 16.1
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 15.8
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 15.5
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 15.3
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 15.1
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 15.1
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 15.0
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 14.9
GTEX-117YX-0526-SM-5EGJH 50-59 years, male 14.7
Show all
Colon - Transverse
RPKM: 7.7
Samples: 196

Max RPKM: 17.0
Min RPKM: 3.5
Std RPKM: 2.9
Median RPKM: 7.0
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 17.0
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 16.5
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 15.4
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 14.6
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 14.2
GTEX-S341-1426-SM-4AD6U 40-49 years, female 14.2
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 14.1
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 14.0
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 13.8
GTEX-117YX-0826-SM-5H11J 50-59 years, male 13.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

30.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 30.4
FF:10014-101C5 62,83,84 years, mixed 30.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.